| Protein: | NONO |
| Organism: | Homo sapiens |
| Length: | 471 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NONO.
| Description | E-value | Query Range |
Subject Range |
|
|
7.0E-71 | [12..460] | [32..482] |
|
|
6.0E-70 | [12..460] | [32..482] |
|
|
9.0E-68 | [12..465] | [32..487] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MQSNKTFNLE KQNHTPRKHH QHHHQQQHHQ QQQQQPPPPP IPANGQQASS QNEGLTIDLK 60
61 NFRKPGEKTF TQRSRLFVGN LPPDITEEEM RKLFEKYGKA GEVFIHKDKG FGFIRLETRT 120
121 LAEIAKVELD NMPLRGKQLR VRFACHSASL TVRN
|
| Detection Method: |  |
| Confidence: | 18.69897 |
| Match: | 2cpjA |
| Description: | Solution structure of the N-terminal RNA recognition motif of NonO |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [155-336] |
1 11 21 31 41 51
| | | | | |
1 LPQYVSNELL EEAFSVFGQV ERAVVIVDDR GRPSGKGIVE FSGKPAARKA LDRCSEGSFL 60
61 LTTFPRPVTV EPMDQLDDEE GLPEKLVIKN QQFHKEREQP PRFAQPGSFE YEYAMRWKAL 120
121 IEMEKQQQDQ VDRNIKEARE KLEMEMEAAR HEHQVMLMRQ DLMRRQEELR RMEELHNQEV 180
181 QK
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1qm9A |
| Description: | Polypyrimidine tract-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 5.15097136329571 | bayes_pls_golite062009 |
| mRNA binding | 4.05281507540116 | bayes_pls_golite062009 |
| nucleic acid binding | 3.81920018903278 | bayes_pls_golite062009 |
| 3.6767428476083 | bayes_pls_golite062009 | |
| binding | 3.05116833253954 | bayes_pls_golite062009 |
| poly-pyrimidine tract binding | 1.54272391619365 | bayes_pls_golite062009 |
| single-stranded RNA binding | 1.46469774223879 | bayes_pls_golite062009 |
| transcription regulator activity | 1.07788694919471 | bayes_pls_golite062009 |
| DNA binding | 0.978604858165557 | bayes_pls_golite062009 |
| snRNA binding | 0.90828362378369 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.591700155096213 | bayes_pls_golite062009 |
| protein binding | 0.42571879933058 | bayes_pls_golite062009 |
| transcription factor activity | 0.234742017105535 | bayes_pls_golite062009 |
|
Region A: Residues: [337-471] |
1 11 21 31 41 51
| | | | | |
1 RKQLELRQEE ERRRREEEMR RQQEEMMRRQ QEGFKGTFPD AREQEIRMGQ MAMGGAMGIN 60
61 NRGAMPPAPV PAGTPAPPGP ATMMPDGTLG LTPPTTERFG QAATMEGIGA IGGTPPAFNR 120
121 AAPGAEFAPN KRRRY
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
