| Protein: | gi|113631781, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 395 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113631781, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
310.0 | [0..2] | [347..1] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MVRETGYYDV LGVSPTATEV EIKKAYYMKA RKVHPDKNPN DPLAAAKFQE LGEAYQVLSD 60
61 PTQRQAYDSY GKSGISTEAI IDPAAIFAML FGSELFEDYI GQLAMASMAS LDIFGDEEEI 120
121 D
|
| Detection Method: |  |
| Confidence: | 21.69897 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| unfolded protein binding | 3.04403163860617 | bayes_pls_golite062009 |
| heat shock protein binding | 2.17994194200939 | bayes_pls_golite062009 |
| binding | 2.03854863870179 | bayes_pls_golite062009 |
| chaperone binding | 1.61155546076854 | bayes_pls_golite062009 |
| protein binding | 0.912937133925792 | bayes_pls_golite062009 |
| Hsp70 protein binding | 0.541755903922701 | bayes_pls_golite062009 |
| nucleic acid binding | 0.423488346839872 | bayes_pls_golite062009 |
| transcription regulator activity | 0.146399219759372 | bayes_pls_golite062009 |
| catalytic activity | 0.106988907594358 | bayes_pls_golite062009 |
| DNA binding | 0.10307408349439 | bayes_pls_golite062009 |
|
Region A: Residues: [122-395] |
1 11 21 31 41 51
| | | | | |
1 ARMLQEKMRV VQKEREEKLA ETLKNKLHLY VQGNKEEFVQ FAEAEVSRLS NAAYGVDMLS 60
61 TIGYVYSRQA AKELGKKAIY LGVPFIAEWF RNKGHYIKSQ VTAATGAIAL MQLQEDLKKH 120
121 LSAECHYTEE ELEAYMETHK SVMVDSLWKL NVADIEGTLS HVCQMVLQDS TIRREELRAR 180
181 AKGLKTLGKI FQRVKLGSSE GEVTTINNTI NNSDDNDGSS PDSSPMSPRE HPYDPNPPYY 240
241 QSPYVEAPQF VGGYPSLNFP MPTAPPGAQR DPIP
|
| Detection Method: | |
| Confidence: | 28.30103 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.13705208493215 | bayes_pls_golite062009 |
| unfolded protein binding | 2.04158808514315 | bayes_pls_golite062009 |
| protein binding | 0.882827615657312 | bayes_pls_golite062009 |
| protein disulfide isomerase activity | 0.290861970307477 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, transposing S-S bonds | 0.290861970307477 | bayes_pls_golite062009 |
| catalytic activity | 0.276917867171685 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, interconverting keto- and enol-groups | 0.0964866497718595 | bayes_pls_golite062009 |
