| Protein: | CLEC4M |
| Organism: | Homo sapiens |
| Length: | 399 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLEC4M.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-44 | [1..399] | [1..399] |
|
|
1.0E-43 | [1..399] | [1..399] |
|
|
2.0E-43 | [1..399] | [1..399] |
|
|
4.0E-41 | [1..399] | [1..422] |
|
|
3.0E-40 | [1..399] | [1..376] |
|
|
3.0E-40 | [1..399] | [1..388] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MSDSKEPRVQ QLGLLEEDPT TSGIRLFPRD FQFQQIHGHK SSTGCLGHGA LVLQLLSFML 60
61 LAGVLVAILV QVSKVPSSLS QEQSEQDAIY QNLTQLKAAV GELSEKSKLQ EIYQELTQLK 120
121 AAVGELPEKS KLQEIYQELT RLKAAVGELP EKSKLQEIYQ ELTRLKAAVG EL
|
| Detection Method: |  |
| Confidence: | 18.221849 |
| Match: | 2o6qA |
| Description: | No description for 2o6qA was found. |
|
Region A: Residues: [173-262] |
1 11 21 31 41 51
| | | | | |
1 PEKSKLQEIY QELTRLKAAV GELPEKSKLQ EIYQELTELK AAVGELPEKS KLQEIYQELT 60
61 QLKAAVGELP DQSKQQQIYQ ELTDLKTAFE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.985 | a.24.4 | Hemerythrin |
|
Region A: Residues: [263-399] |
1 11 21 31 41 51
| | | | | |
1 RLCRHCPKDW TFFQGNCYFM SNSQRNWHDS VTACQEVRAQ LVVIKTAEEQ NFLQLQTSRS 60
61 NRFSWMGLSD LNQEGTWQWV DGSPLSPSFQ RYWNSGEPNN SGNEDCAEFS GSGWNDNRCD 120
121 VDNYWICKKP AACFRDE
|
| Detection Method: | |
| Confidence: | 26.09691 |
| Match: | 1sl6A |
| Description: | Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x. |
Matching Structure (courtesy of the PDB): |
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