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View Structure Prediction Details

Protein: DNAJA2
Organism: Homo sapiens
Length: 412 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNAJA2.

Description E-value Query
Range
Subject
Range
gi|53134035, gi|... - gi|57524857|ref|NP_001005841.1| DnaJ (Hsp40) homolog, subfamily A, member 2 [Gallus gallus], gi|5313...
0.0 [1..412] [1..411]
DNJA2_BOVIN - DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1
0.0 [1..412] [1..412]
gi|114662436 - gi|114662436|ref|XP_528644.2| PREDICTED: DnaJ subfamily A member 2 [Pan troglodytes]
0.0 [1..412] [109..519]
gi|32450159, gi|... - gi|32450159|gb|AAH53791.1| Dnaja2-prov protein [Xenopus laevis], gi|148227640|ref|NP_001080625.1| Dn...
0.0 [1..412] [1..410]
gi|47220868 - gi|47220868|emb|CAG03075.1| unnamed protein product [Tetraodon nigroviridis]
0.0 [1..411] [2..430]
gi|52345518, gi|... - gi|52345518|ref|NP_001004807.1| MGC69518 protein [Xenopus (Silurana) tropicalis], gi|49250545|gb|AAH...
0.0 [1..412] [1..410]
gi|46329658, gi|... - gi|50811832|ref|NP_998658.1| DnaJ subfamily A member 2 [Danio rerio], gi|46329658|gb|AAH68384.1| Dna...
0.0 [1..412] [1..412]
gi|109094760 - gi|109094760|ref|XP_001082094.1| PREDICTED: DnaJ subfamily A member 2 [Macaca mulatta]
0.0 [1..412] [1..412]
gi|149032622, gi... - gi|56799412|ref|NP_114468.2| DnaJ (Hsp40) homolog, subfamily A, member 2 [Rattus norvegicus], gi|565...
DNJA2_MOUSE - DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1
0.0 [1..412] [1..412]

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Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANVADTKLY DILGVPPGAS ENELKKAYRK LAKEYHPDKN PNAGDKFKEI SFAYEVLSNP  60
   61 EKRELYDRYG EQGLREGSGG GGGMDDI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.39794
Match: 1bq0A
Description: J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
unfolded protein binding 3.04403163860617 bayes_pls_golite062009
chaperone binding 2.86745334638583 bayes_pls_golite062009
protein binding 2.65982681685488 bayes_pls_golite062009
binding 2.63138872417193 bayes_pls_golite062009
heat shock protein binding 2.17994194200939 bayes_pls_golite062009
transcription regulator activity 1.91297632253219 bayes_pls_golite062009
nucleic acid binding 1.6342534817623 bayes_pls_golite062009
DNA binding 1.55234338199368 bayes_pls_golite062009
transporter activity 1.29863098651348 bayes_pls_golite062009
substrate-specific transporter activity 0.812144232432417 bayes_pls_golite062009
protein transporter activity 0.599800483479766 bayes_pls_golite062009
Hsp70 protein binding 0.541755903922701 bayes_pls_golite062009
transferase activity 0.240656521918556 bayes_pls_golite062009
catalytic activity 0.106988907594358 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.0276971914937192 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [88-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSHIFGGGLF GFMGNQSRSR NGRRRGEDMM HPLKVSLEDL YNGKTTKLQL SKNVLCSACS  60
   61 GQGGKSGAVQ KCSACRGRGV RIMIRQLAPG MVQQMQSVCS DCNGEGEVIN EKDRCKKCEG 120
  121 KKVIKEVKIL EVHVDKGMKH GQRITFTGEA DQAPGVEPGD IVLLLQEKEH EVFQRDGNDL 180
  181 HMTYKIGLVE ALCGFQFTFK HLDGRQIVVK YPPGKVIEPG CVRVVRGEGM PQYRNPFEKG 240
  241 DLYIKFDVQF PENNWINPDK LSELEDLLPS RPEVPNIIGE TEEVELQEFD STRGSGGGQR 300
  301 REAYNDSSDE ESSSHHGPGV QCAHQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.39794
Match: 1nltA
Description: The crystal structure of Hsp40 Ydj1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.7298921704023 bayes_pls_golite062009
protein binding 2.6297172985864 bayes_pls_golite062009
protein disulfide isomerase activity 2.4409950647303 bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing S-S bonds 2.4409950647303 bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting keto- and enol-groups 2.23398279564144 bayes_pls_golite062009
unfolded protein binding 2.04158808514315 bayes_pls_golite062009
receptor binding 0.395342079633271 bayes_pls_golite062009
catalytic activity 0.276917867171685 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle