| Protein: | snf-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 714 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for snf-6.
| Description | E-value | Query Range |
Subject Range |
|
|
612.0 | [0..10] | [661..249] |
|
Region A: Residues: [1-623] |
1 11 21 31 41 51
| | | | | |
1 MSVSSNDPEQ RNGRGMASGN NVDMSLYPPF IKQLDAKLPD YTREGDIEYP FEEITGVGDE 60
61 NRIRGNWSNK SDYLLAVIGF TAGVGSFWKF PFLVFQHGGA AFLVPYLCML CLASLPMFFM 120
121 EMVLGQFSSS AAISVWKVVP LFKGIGFAQV TISGFFAVFF NIISAWTLFY LINSFSFSIP 180
181 WSNCANSWSG ENCTLGTRIQ CKEMNGTLLV NGSCIVEHAS SNETTVIPLH DLGSIPSLKY 240
241 FQNDVLMLSK GVDDFGTLNW YLGLCVLACW IAVFLCLFQG VKSSGKVVYV AVIVPFIILT 300
301 VLLTRLLTLD GSLAAVFYFL TPKWEILMDL HVWGEAAVQA FYSVSCCSGG LFTIASYSRF 360
361 HNNIYKDIWL VLIVDVIVSL VGCLLTFSAI GFTCYEFAIS LDKFHIRDGF HLVFVFLAEA 420
421 LAGVSVAPLY AGLFFIMILL VVHATQMFVV ETIVSSICDE YPERLRRNRR HVLTTVCALF 480
481 ILLSIPFCLS SGLFWMELLT QFVLTWPLVV IAFLECMAIN WVYGVDNMLD NAKWIVGYWP 540
541 PCYIFWKILF KFICPMVYLA ILCFLWLDWN SIQYESYQFP YWSILTAWCI ASFPLILIPI 600
601 VGIWQFCIAK GTITQKWWRV LYP
|
| Detection Method: |  |
| Confidence: | 59.045757 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [624-714] |
1 11 21 31 41 51
| | | | | |
1 DDAWGPAMAI HRAEKFPLQI PEARRLLLPP EVEIASSRGV LQEEMPMSYD YNTSSAADVR 60
61 SNRSTGHGAT DVRSVAATNN TIPKFERETA I
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
