| Protein: | gi|13259512, gi|... |
| Organism: | Homo sapiens |
| Length: | 262 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13259512, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
6.0E-97 | [1..262] | [1..294] |
|
|
1.0E-96 | [1..262] | [1..294] |
|
|
1.0E-96 | [1..262] | [1..297] |
|
|
2.0E-96 | [1..262] | [1..294] |
|
|
1.0E-94 | [10..259] | [1..281] |
|
|
4.0E-94 | [3..259] | [1..288] |
|
|
6.0E-94 | [12..259] | [8..285] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MAMSSGGSGG GVPEQEDSVL FRRGTGQSDD SDIWDDTALI KAYDKAVASF KHALKNGDIC 60
61 ETSGKPKTTP KRKPA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [76-163] |
1 11 21 31 41 51
| | | | | |
1 KKNKSQKKNT AASLQQWKVG DKCSAIWSED GCIYPATIAS IDFKRETCVV VYTGYGNREE 60
61 QNLSDLLSPI CEVANNIEQN AQENENES
|
| Detection Method: | |
| Confidence: | 29.0 |
| Match: | 1g5vA |
| Description: | Survival motor neuron protein 1, smn |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.346102840207765 | bayes_pls_golite062009 |
|
Region A: Residues: [164-262] |
1 11 21 31 41 51
| | | | | |
1 QVSTDESENS RSPGNKSDNI KPKSAPWNSF LPPPPPMPGP RLGPGKIIPP PPPICPDSLD 60
61 DADALGSMLI SWYMSGYHTG YYMGFRQNQK EGRCSHSLN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
