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View Structure Prediction Details

Protein: CIDEA
Organism: Homo sapiens
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CIDEA.

Description E-value Query
Range
Subject
Range
CIDEA_MOUSE - Cell death activator CIDE-A OS=Mus musculus GN=Cidea PE=1 SV=2
0.0 [1..216] [1..216]
gi|114672127 - gi|114672127|ref|XP_523993.2| PREDICTED: cell death-inducing DFFA-like effector a [Pan troglodytes]
3.0E-98 [1..219] [1..219]
gi|34396082 - gi|34396082|gb|AAQ65241.1| cell death activator [Homo sapiens]
6.0E-98 [1..219] [1..219]
gi|109121516 - gi|109121516|ref|XP_001094509.1| PREDICTED: similar to cell death-inducing DFFA-like effector a isof...
1.0E-94 [1..219] [1..219]
gi|109506731 - gi|109506731|ref|XP_214551.4| PREDICTED: similar to cell death-inducing DNA fragmentation factor, al...
5.0E-89 [14..216] [260..460]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAARDYAGA LIRPLTFMGS QTKRVLFTPL MHPARPFRVS NHDRSSRRGV MASSLQELIS  60
   61 KTLDALVIAT GLVTLVLEED GTVVDTEEFF QTLGDNTHFM ILEKGQKWMP GSQHVPTCS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 2eelA
Description: No description for 2eelA was found.

Predicted Domain #2
Region A:
Residues: [120-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPKRSGIARV TFDLYRLNPK DFIGCLNVKA TMYEMYSVSY DIRCTGLKGL LRSLLRFLSY  60
   61 SAQVTGQFLI YLGTYMLRVL DDKEERPSLR SQAKGRFTCG 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.858 0.430 mitochondrial envelope a.24.3 Cytochromes
View Download 0.725 0.066 DNA fragmentation involved in apoptosis a.118.1 ARM repeat
View Download 0.763 0.046 apoptosis a.7.7 BAG domain
View Download 0.682 0.017 DNA fragmentation involved in apoptosis a.7.1 Spectrin repeat
View Download 0.745 0.003 DNA fragmentation involved in apoptosis f.17.1 F1F0 ATP synthase subunit C


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle