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View Structure Prediction Details

Protein: CE40186
Organism: Caenorhabditis elegans
Length: 431 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40186.

Description E-value Query
Range
Subject
Range
gi|91084087 - gi|91084087|ref|XP_968449.1| PREDICTED: similar to sodium/solute symporter [Tribolium castaneum]
298.0 [0..1] [426..142]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVVLYAPSV ALSPVLQINK WYLVLIFGCT TTLYTCLGGL KAVVWTDSLQ AVIMYTGVFT  60
   61 LIYKGLSHPR VGGLERVLSI AWDSG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [86-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RISELGRMDW RIDQYNSLWI NLFSGTIVWL ASFGVNQLAI QRYASLPSLK VAQSIIIYTL  60
   61 APFTVLCSIV AFVGFIALAY FYNCNPLETG EVKES

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [181-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DHITISFARD ILQPTPGLFG LYVSCIMSAT LSTLSSGMNS MAAAIYEDFL KNSLDGKITD  60
   61 TGATRLNKII VLICGLSSTG LAFLAEV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [268-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGGSLRICIS VMGAMSGPMV AIFVLALFFP KSGSKSCLIS FFLSNLFCLI ICIANYIQDP  60
   61 YHDLFLPTNT TLEGCNGNSN FTIRMMPTYD AHYGNPDTLY ISRISTYSYA GVGFVLMIII 120
  121 GWIASLFEES DHKVEKIRHL TFSGRNEPWP DTHHEFDHFL KEIK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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