| Protein: | gi|6330197 |
| Organism: | Homo sapiens |
| Length: | 838 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6330197.
| Description | E-value | Query Range |
Subject Range |
|
|
1452.0 | [0..5] | [838..1] |
|
|
1447.0 | [0..1] | [838..56] |
|
|
1446.0 | [0..1] | [838..56] |
|
|
1434.0 | [0..5] | [838..1] |
|
|
1417.0 | [0..24] | [836..68] |
|
|
1416.0 | [0..24] | [836..37] |
|
|
1413.0 | [0..24] | [836..37] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 LTSSMEDPAA PGTGGPPANG NGNGGGKGKQ AAPKGREAFR SQRRESEGSV DCPTLEFEYG 60
61 DADGHAAELS ELYSYTENLE FTNNRRCFEE DFKTQVQGK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.332 | a.3.1 | Cytochrome c |
| View | Download | 0.332 | a.3.1 | Cytochrome c |
| View | Download | 0.231 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.230 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.230 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.219 | a.46.1 | Methionine synthase domain |
|
Region A: Residues: [100-304] |
1 11 21 31 41 51
| | | | | |
1 EWLELEEDAQ KAYIMGLLDR LEVVSRERRL KVARAVLYLA QGTFGECDSE VDVLHWSRYN 60
61 CFLLYQMGTF STFLELLHME IDNSQACSSA LRKPAVSIAD STELRVLLSV MYLMVENIRL 120
121 ERETDPCGWR TARETFRTEL SFSMHNEEPF ALLLFSMVTK FCSGLAPHFP IKKVLLLLWK 180
181 VVMFTLGGFE HLQTLKVQKR AELGL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [305-374] |
1 11 21 31 41 51
| | | | | |
1 PPLAEDSIQV VKSMRAASPP SYTLDLGESQ LAPPPSKLRG RRGSRRQLLT KQDSLDIYNE 60
61 RDLFKTEEPA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.722 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.667 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.667 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.635 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.630 | a.29.8 | Description not found. |
| View | Download | 0.535 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.471 | a.4.1 | Homeodomain-like |
| View | Download | 0.471 | a.4.1 | Homeodomain-like |
| View | Download | 0.457 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.430 | a.4.1 | Homeodomain-like |
| View | Download | 0.351 | a.59.1 | PAH2 domain |
| View | Download | 0.307 | a.4.1 | Homeodomain-like |
| View | Download | 0.268 | a.4.1 | Homeodomain-like |
| View | Download | 0.267 | a.4.1 | Homeodomain-like |
|
Region A: Residues: [375-569] |
1 11 21 31 41 51
| | | | | |
1 TEEEEESAGD GERTLDGELD LLEQDPLVPP PPSQAPLSAE RVAFPKGLPW APKVRQKDIE 60
61 HFLEMSRNKF IGFTLGQDTD TLVGLPRPIH ESVKTLKQHK YISIADVQIK NEEELEKCPM 120
121 SLGEEVVPET PCEILYQGML YSLPQYMIAL LKILLAAAPT SKAKTDSINI LADVLPEEMP 180
181 ITVLQSMKLG IDVNR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [570-838] |
1 11 21 31 41 51
| | | | | |
1 HKEIIVKSIS TLLLLLLKHF KLNHIYQFEY VSQHLVFANC IPLILKFFNQ NILSYITAKN 60
61 SISVLDYPCC TIQDLPELTT ESLEAGDNSQ FCWRNLFSCI NLLRLLNKLT KWKHSRTMML 120
121 VVFKSAPILK RALKVKQAML QLYVLKLLKL QTKYLGRQWR KSNMKTMSAI YQKVRHRMND 180
181 DWAYGNDIDA RPWDFQAEEC TLRANIEAFN SRRYDRPQDS EFSPVDNCLQ SVLGQRLDLP 240
241 EDFHYSYELW LEREVFSQPI CWEELLQNH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
