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View Structure Prediction Details

Protein: prmt-3
Organism: Caenorhabditis elegans
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for prmt-3.

Description E-value Query
Range
Subject
Range
prmt-3 - status:Confirmed UniProt:O02325 protein_id:CAB07676.1
440.0 [0..1] [219..462]

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Predicted Domain #1
Region A:
Residues: [1-46]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGEIDPIEL PFTRDISSSI PAQCVLNTVE SQTPIRHLIT NFCRYD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [47-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTLDQETFFR IEEFVGFRDH VQKIVPTKFR ILGHLFYSDR VHFDARPDPS AHCQVDLSTV  60
   61 RSFNLREMRD IRLTQREDIV MASKEFVLYD FNISAEKFRQ DTYITVTQDV TVQPTRPIAD 120
  121 GVIYEFEILG IRNTKLRPVA AFLFPERVNT NPDMTVVFDL HLGEMLISLK DLP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle