YRC Public Data Repository - Protein Structure Prediction

Protein:	ANP32B
Organism:	Homo sapiens
Length:	251 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ANP32B.

Description	E-value	Query Range	Subject Range
gi\|186468985, gi... - gi\|23124578\|ref\|ZP_00106558.1\| COG4886: Leucine-rich repeat (LRR) protein [Nostoc punctiforme PCC 73...	7.0E-36	[1..228]	[25..244]
gi\|50928147, gi\|... - gi\|50928147\|ref\|XP_473601.1\| OSJNBa0020J04.8 [Oryza sativa (japonica cultivar-group)], gi\|38345533\|e...	8.0E-36	[1..228]	[437..669]
gi\|47498985 - gi\|47498985\|gb\|AAT28308.1\| leucine-rich repeat receptor-like protein kinase [Pyrus pyrifolia]	1.0E-35	[1..251]	[94..347]
gi\|3641252 - gi\|3641252\|gb\|AAC36318.1\| leucine-rich receptor-like protein kinase [Malus x domestica]	2.0E-35	[1..251]	[95..348]
gi\|116309677, gi... - gi\|125549425\|gb\|EAY95247.1\| hypothetical protein OsI_016480 [Oryza sativa (indica cultivar-group)], ...	2.0E-35	[1..228]	[490..722]
FBpp0300846 - type=protein; loc=3R:join(22363345..22363506,22370765..22370882,22380079..22380661,22380955..2238137...	6.0E-35	[1..250]	[39..281]
gi\|54638167, gi\|... - gi\|54638167\|gb\|EAL27569.1\| GA18897-PA [Drosophila pseudoobscura], gi\|125774343\|ref\|XP_001358430.1\| G...	6.0E-35	[1..250]	[62..304]

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Predicted Domain #1

Region A:
Residues: [1-149]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMKRRIHLE LRNRTPAAVR ELVLDNCKSN DGKIEGLTAE FVNLEFLSLI NVGLISVSNL  60
   61 PKLPKLKKLE LSENRIFGGL DMLAEKLPNL THLNLSGNKL KDISTLEPLK KLECLKSLDL 120
  121 FNCEVTNLND YRESVFKLLP QLTYLDGYD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	12.522879
Match:	2je0A
Description:	No description for 2je0A was found.

Predicted Domain #2

Region A:
Residues: [150-251]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 REDQEAPDSD AEVDGVDEEE EDEEGEDEED EDDEDGEEEE FDEEDDEDED VEGDEDDDEV  60
   61 SEEEEEFGLD EEDEDEDEDE EEEEGGKGEK RKRETDDEGE DD

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.03
Match:	2j63A
Description:	No description for 2j63A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits