| Protein: | NCKAP1 |
| Organism: | Homo sapiens |
| Length: | 1128 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NCKAP1.
| Description | E-value | Query Range |
Subject Range |
|
|
1986.0 | [0..1] | [1128..218] |
|
|
1982.0 | [0..1] | [1128..255] |
|
|
1973.0 | [0..1] | [1128..195] |
|
|
1948.0 | [0..1] | [1128..1] |
|
|
1947.0 | [0..1] | [1128..38] |
|
|
1946.0 | [0..1] | [1128..1] |
|
|
1916.0 | [0..1] | [1128..1] |
|
|
1882.0 | [0..36] | [1128..35] |
|
Region A: Residues: [1-244] |
1 11 21 31 41 51
| | | | | |
1 MSRSVLQPSQ QKLAEKLTIL NDRGVGMLTR LYNIKKACGD PKAKPSYLID KNLESAVKFI 60
61 VRKFPAVETR NNNQQLAQLQ KEKSEILKNL ALYYFTFVDV MEFKDHVCEL LNTIDVCQVF 120
121 FDITVNFDLT KNYLDLIITY TTLMILLSRI EERKAIIGLY NYAHEMTHGA SDREYPRLGQ 180
181 MIVDYENPLK KMMEEFVPHS KSLSDALISL QMVYPRRNLS ADQWRNAQLL SLISAPSTML 240
241 NPAQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [245-393] |
1 11 21 31 41 51
| | | | | |
1 SDTMPCEYLS LDAMEKWIIF GFILCHGILN TDATALNLWK LALQSSSCLS LFRDEVFHIH 60
61 KAAEDLFVNI RGYNKRINDI RECKEAAVSH AGSMHRERRK FLRSALKELA TVLSDQPGLL 120
121 GPKALFVFMA LSFARDEIIW LLRHADNMP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [394-508] |
1 11 21 31 41 51
| | | | | |
1 KKSADDFIDK HIAELIFYME ELRAHVRKYG PVMQRYYVQY LSGFDAVVLN ELVQNLSVCP 60
61 EDESIIMSSF VNTMTSLSVK QVEDGEVFDF RGMRLDWFRL QAYTSVSKAS LGLAD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.979 | a.24.17 | Group V grass pollen allergen |
|
Region A: Residues: [509-653] |
1 11 21 31 41 51
| | | | | |
1 HRELGKMMNT IIFHTKMVDS LVEMLVETSD LSIFCFYSRA FEKMFQQCLE LPSQSRYSIA 60
61 FPLLCTHFMS CTHELCPEER HHIGDRSLSL CNMFLDEMAK QARNLITDIC TEQCTLSDQL 120
121 LPKHCAKTIS QAVNKKSKKQ TGKKG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.869 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
|
Region A: Residues: [654-817] |
1 11 21 31 41 51
| | | | | |
1 EPEREKPGVE SMRKNRLVVT NLDKLHTALS ELCFSINYVP NMVVWEHTFT PREYLTSHLE 60
61 IRFTKSIVGM TMYNQATQEI AKPSELLTSV RAYMTVLQSI ENYVQIDITR VFNNVLLQQT 120
121 QHLDSHGEPT ITSLYTNWYL ETLLRQVSNG HIAYFPAMKA FVNL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [818-933] |
1 11 21 31 41 51
| | | | | |
1 PTENELTFNA EEYSDISEMR SLSELLGPYG MKFLSESLMW HISSQVAELK KLVVENVDVL 60
61 TQMRTSFDKP DQMAALFKRL SSVDSVLKRM TIIGVILSFR SLAQEALRDV LSYHIP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.977 | a.47.1 | STAT |
|
Region A: Residues: [934-1128] |
1 11 21 31 41 51
| | | | | |
1 FLVSSIEDFK DHIPRETDMK VAMNVYELSS AAGLPCEIDP ALVVALSSQK SENISPEEEY 60
61 KIACLLMVFV AVSLPTLASN VMSQYSPAIE GHCNNIHCLA KAINQIAAAL FTIHKGSIED 120
121 RLKEFLALAS SSLLKIGQET DKTTTRNRES VYLLLDMIVQ ESPFLTMDLL ESCFPYVLLR 180
181 NAYHAVYKQS VTSSA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
