| Protein: | HIST1H1D |
| Organism: | Homo sapiens |
| Length: | 221 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HIST1H1D.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-26 | [2..219] | [950..1168] |
|
|
1.0E-24 | [4..198] | [1496..1686] |
|
|
5.0E-24 | [5..220] | [1018..1248] |
|
|
6.0E-23 | [4..220] | [556..772] |
|
|
7.0E-23 | [2..221] | [568..793] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MSETAPLAPT IPAPAEKTPV KKKAKKAGAT AGKRKASGPP VSELITKAVA ASKERSGVSL 60
61 AALKKALAAA GYDVEKNNSR IKLGLKSLVS KGTLVQTKGT GASGSFKLNK KAASGEG
|
| Detection Method: |  |
| Confidence: | 7.221849 |
| Match: | 1ghcA |
| Description: | HOMO-AND HETERONUCLEAR TWO-DIMENSIONAL NMR STUDIES OF THE GLOBULAR DOMAIN OF HISTONE H1: FULL ASSIGNMENT, TERTIARY STRUCTURE, AND COMPARISON WITH THE GLOBULAR DOMAIN OF HISTONE H5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [118-221] |
1 11 21 31 41 51
| | | | | |
1 KPKAKKAGAA KPRKPAGAAK KPKKVAGAAT PKKSIKKTPK KVKKPATAAG TKKVAKSAKK 60
61 VKTPQPKKAA KSPAKAKAPK PKAAKPKSGK PKVTKAKKAA PKKK
|
| Detection Method: | |
| Confidence: | 1.79 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
