| Protein: | HIST1H1C |
| Organism: | Homo sapiens |
| Length: | 213 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HIST1H1C.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-25 | [2..212] | [3259..3461] |
|
|
4.0E-23 | [2..212] | [1135..1349] |
|
|
7.0E-23 | [11..212] | [1019..1225] |
|
|
1.0E-22 | [3..213] | [54..265] |
|
|
4.0E-22 | [2..212] | [3293..3497] |
|
|
1.0E-21 | [31..206] | [433..626] |
|
|
2.0E-21 | [2..213] | [567..793] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MSETAPAAPA AAPPAEKAPV KKKAAKKAGG TPRKASGPPV SELITKAVAA SKERSGVSLA 60
61 ALKKALAAAG YDVEKNNSRI KLGLKSLVSK GTLVQTKGTG ASGSFKLNKK AA
|
| Detection Method: |  |
| Confidence: | 6.154902 |
| Match: | 1ghcA |
| Description: | HOMO-AND HETERONUCLEAR TWO-DIMENSIONAL NMR STUDIES OF THE GLOBULAR DOMAIN OF HISTONE H1: FULL ASSIGNMENT, TERTIARY STRUCTURE, AND COMPARISON WITH THE GLOBULAR DOMAIN OF HISTONE H5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [113-213] |
1 11 21 31 41 51
| | | | | |
1 SGEAKPKVKK AGGTKPKKPV GAAKKPKKAA GGATPKKSAK KTPKKAKKPA AATVTKKVAK 60
61 SPKKAKVAKP KKAAKSAAKA VKPKAAKPKV VKPKKAAPKK K
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
