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View Structure Prediction Details

Protein: C17orf39
Organism: Homo sapiens
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C17orf39.

Description E-value Query
Range
Subject
Range
gi|109113504 - gi|109113504|ref|XP_001092897.1| PREDICTED: similar to Protein C17orf39 homolog [Macaca mulatta]
0.0 [1..300] [1..300]
gi|18676842 - gi|18676842|dbj|BAB85036.1| unnamed protein product [Homo sapiens]
0.0 [1..300] [1..300]
GID4_MOUSE - Glucose-induced degradation protein 4 homolog OS=Mus musculus GN=Gid4 PE=1 SV=1
0.0 [84..300] [1..217]
gi|74268088 - gi|74268088|gb|AAI02716.1| C19H17ORF39 protein [Bos taurus]
0.0 [80..300] [22..242]
gi|49086560, gi|... - gi|67518023|ref|XP_658783.1| hypothetical protein AN1179.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
0.0 [19..300] [26..287]
gi|47226089 - gi|47226089|emb|CAG04463.1| unnamed protein product [Tetraodon nigroviridis]
5.0E-97 [84..300] [1..218]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCARGQVGRG TQLRTGRPCS QVPGSRWRPE RLLRRQRAGG RPSRPHPARA RPGLSLPATL  60
   61 LGSRAAAAVP LPLPPALAPG DPAMPVRTEC PPPAGASAAS AASLIPPPPI NTQQPGVATS 120
  121 L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [122-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYSGSKFRGH QKSKGNSYDV EVVLQHVDTG NSYLCGYLKI KGLTEEYPTL TTFFEGEIIS  60
   61 KKHPFLTRKW DADEDVDRKH WGKFLAFYQY AKSFNSDDFD YEELKNGDYV FMRWKEQFLV 120
  121 PDHTIKDISG ASFAGFYYIC FQKSAASIEG YYYHRSSEWY QSLNLTHVPE HSAPIYEFR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle