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View Structure Prediction Details

Protein: C17orf39
Organism: Homo sapiens
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C17orf39.

Description E-value Query
Range
Subject
Range
gi|109113504 - gi|109113504|ref|XP_001092897.1| PREDICTED: similar to Protein C17orf39 homolog [Macaca mulatta]
0.0 [1..300] [1..300]
gi|18676842 - gi|18676842|dbj|BAB85036.1| unnamed protein product [Homo sapiens]
0.0 [1..300] [1..300]
GID4_MOUSE - Glucose-induced degradation protein 4 homolog OS=Mus musculus GN=Gid4 PE=1 SV=1
0.0 [84..300] [1..217]
gi|74268088 - gi|74268088|gb|AAI02716.1| C19H17ORF39 protein [Bos taurus]
0.0 [80..300] [22..242]
gi|49086560, gi|... - gi|67518023|ref|XP_658783.1| hypothetical protein AN1179.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
0.0 [19..300] [26..287]
gi|47226089 - gi|47226089|emb|CAG04463.1| unnamed protein product [Tetraodon nigroviridis]
5.0E-97 [84..300] [1..218]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCARGQVGRG TQLRTGRPCS QVPGSRWRPE RLLRRQRAGG RPSRPHPARA RPGLSLPATL  60
   61 LGSRAAAAVP LPLPPALAPG DPAMPVRTEC PPPAGASAAS AASLIPPPPI NTQQPGVATS 120
  121 L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.275 N/A N/A a.1.2 alpha-helical ferredoxin
View Download 0.253 N/A N/A b.18.1 Galactose-binding domain-like

Predicted Domain #2
Region A:
Residues: [122-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYSGSKFRGH QKSKGNSYDV EVVLQHVDTG NSYLCGYLKI KGLTEEYPTL TTFFEGEIIS  60
   61 KKHPFLTRKW DADEDVDRKH WGKFLAFYQY AKSFNSDDFD YEELKNGDYV FMRWKEQFLV 120
  121 PDHTIKDISG ASFAGFYYIC FQKSAASIEG YYYHRSSEWY QSLNLTHVPE HSAPIYEFR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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