| Protein: | gi|7243181 |
| Organism: | Homo sapiens |
| Length: | 1093 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7243181.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [39..1093] | [46..1098] |
|
|
0.0 | [56..1093] | [3..1040] |
|
|
0.0 | [56..1093] | [3..1040] |
|
|
0.0 | [56..1093] | [3..1039] |
|
|
0.0 | [56..1093] | [3..1030] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 SKRSKIFKDR KPQEPPRSAL LFVFFQIFFC FVVVGEVIGW LTGCGKLLPF LLEMIVLLLF 60
61 ALLWMVEGVF SQLHYTVQEE QEHGTFVGNI AEDLGLDITK LSARGFQTVP NSRTPYLDLN 120
121 LETGVLYVNE KIDREQICKQ SPSCVLHLEV FLENPLELFQ VEIEVLDIND NPPSFPEPDL 180
181 TVEISESATP
|
| Detection Method: |  |
| Confidence: | 29.522879 |
| Match: | 1wuzA |
| Description: | Structure of EC1 domain of CNR |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [191-306] |
1 11 21 31 41 51
| | | | | |
1 GTRFPLESAF DPDVGTNSLR DYEITPNSYF SLDVQTQGDG NRFAELVLEK PLDREQQAVH 60
61 RYVLTAVDGG GGGGVGEGGG GGGGAGLPPQ QQRTGTALLT IRVLDSNDNV PAFDQP
|
| Detection Method: | |
| Confidence: | 62.522879 |
| Match: | 2a62A |
| Description: | No description for 2a62A was found. |
|
Region A: Residues: [307-822] |
1 11 21 31 41 51
| | | | | |
1 VYTVSLPENS PPGTLVIQLN ATDPDEGQNG EVVYSFSSHI SPRARELFGL SPRTGRLEVS 60
61 GELDYEESPV YQVYVQAKDL GPNAVPAHCK VLVRVLDAND NAPEISFSTV KEAVSEGAAP 120
121 GTVVALFSVT DRDSEENGQV QCELLGDVPF RLKSSFKNYY TIVTEAPLDR EAGDSYTLTV 180
181 VARDRGEPAL STSKSIQVQV SDVNDNAPRF SQPVYDVYVT ENNVPGAYIY AVSATDRDEG 240
241 ANAQLAYSIL ECQIQGMSVF TYVSINSENG YLYALRSFDY EQLKDFSFQV EARDAGSPQA 300
301 LAGNATVNIL IVDQNDNAPA IVAPLPGRNG TPAREVLPRS AEPGYLLTRV AAVDADDGEN 360
361 ARLTYSIVRG NEMNLFRMDW RTGELRTARR VPAKRDPQRP YELVIEVRDH GQPPLSSTAT 420
421 LVVQLVDGAV EPQGGGGSGG GGSGEHQRPS RSGGGETSLD LTLILIIALG SVSFIFLLAM 480
481 IVLAVRCQKE KKLNIYTCLA SDCCLCCCCC GGGGST
|
| Detection Method: | |
| Confidence: | 74.09691 |
| Match: | 1q55A |
| Description: | W-shaped trans interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [823-891] |
1 11 21 31 41 51
| | | | | |
1 CCGRQARARK KKLSKSDIML VQSSNVPSNP AQVPIEESGG FGSHHHNQNY CYQVCLTPES 60
61 AKTDLMFLK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.289 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.248 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.208 | a.112.1 | Description not found. |
|
Region A: Residues: [892-1093] |
1 11 21 31 41 51
| | | | | |
1 PCSPSRSTDT EHNPCGAIVT GYTDQQPDII SNGSILSNET KHQRAELSYL VDRPRRVNSS 60
61 AFQEADIVSS KDSGHGDSEQ GDSDHDATNR AQSAGMDLFS NCTEECKALG HSDRCWMPSF 120
121 VPSDGRQAAD YRSNLHVPGM DSVPDTEVFE TPEAQPGAER SFSTFGKEKA LHSTLERKEL 180
181 DGLLTNTRAP YKPPYLTRKR IC
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
