| Protein: | gi|27436948 |
| Organism: | Homo sapiens |
| Length: | 634 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|27436948.
| Description | E-value | Query Range |
Subject Range |
|
|
294.0 | [0..1] | [634..437] |
|
|
217.0 | [0..18] | [634..81] |
|
|
211.0 | [0..1] | [634..1] |
|
|
209.0 | [0..1] | [634..1] |
|
|
205.0 | [0..1] | [634..1] |
|
|
196.0 | [0..1] | [634..1] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 METPSQRRAT RSGAQASSTP LSPTRITRLQ EKEDLQELND RLAVYIDRVR SLETENAGLR 60
61 LRITESEEVV SREVSGIKAA YEAELG
|
| Detection Method: |  |
| Confidence: | 7.69897 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [87-307] |
1 11 21 31 41 51
| | | | | |
1 DARKTLDSVA KERARLQLEL SKVREEFKEL KARNTKKEGD LIAAQARLKD LEALLNSKEA 60
61 ALSTALSEKR TLEGELHDLR GQVAKLEAAL GEAKKQLQDE MLRRVDAENR LQTMKEELDF 120
121 QKNIYSEELR ETKRRHETRL VEIDNGKQRE FESRLADALQ ELRAQHEDQV EQYKKELEKT 180
181 YSAKLDNARQ SAERNSNLVG AAHEELQQSR IRIDSLSAQL S
|
| Detection Method: | |
| Confidence: | 2.08 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [308-389] |
1 11 21 31 41 51
| | | | | |
1 QLQKQLAAKE AKLRDLEDSL ARERDTSRRL LAEKEREMAE MRARMQQQLD EYQELLDIKL 60
61 ALDMEIHAYR KLLEGEEERL RL
|
| Detection Method: | |
| Confidence: | 3.09691 |
| Match: | 1x8yA |
| Description: | Human lamin coil 2B |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [390-463] |
1 11 21 31 41 51
| | | | | |
1 SPSPTSQRSR GRASSHSSQT QGGGSVTKKR KLESTESRSS FSQHARTSGR VAVEEVDEEG 60
61 KFVRLRNKSN EDQS
|
| Detection Method: | |
| Confidence: | 2.49 |
| Match: | 1ufgA |
| Description: | Solution structure of immunoglobulin like domain of mouse nuclear lamin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [464-541] |
1 11 21 31 41 51
| | | | | |
1 MGNWQIKRQN GDDPLLTYRF PPKFTLKAGQ VVTIWAAGAG ATHSPPTDLV WKAQNTWGCG 60
61 NSLRTALINS TGEGSHCS
|
| Detection Method: | |
| Confidence: | 16.69897 |
| Match: | 1ufgA |
| Description: | Solution structure of immunoglobulin like domain of mouse nuclear lamin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [542-634] |
1 11 21 31 41 51
| | | | | |
1 SSGDPAEYNL RSRTVLCGTC GQPADKASAS GSGAQVGGPI SSGSSASSVT VTRSYRSVGG 60
61 SGGGSFGDNL VTRSYLLGNS SPRTQSPQNC SIM
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.239 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.227 | N/A | N/A | c.47.1 | Thioredoxin-like |
