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View Structure Prediction Details

Protein: gi|13514822, gi|...
Organism: Homo sapiens
Length: 235 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13514822, gi|....

Description E-value Query
Range
Subject
Range
rha-1 - ATP-dependent RNA helicase status:Partially_confirmed UniProt:Q22307 protein_id:CAA90409.2
1.0E-51 [1..207] [1051..1263]
gi|1082769 - gi|1082769|pir||A47363 RNA helicase A - human
4.0E-51 [1..206] [1035..1239]
DHX9_PONAB - ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1
DHX9_PONPY - ATP-dependent RNA helicase A - Pongo pygmaeus (Orangutan)
1.0E-47 [1..206] [1036..1240]
DHX9_XENLA - ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9 PE=2 SV=1
6.0E-46 [1..157] [1038..1194]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYPSPFFVF GEKIRTRAIS AKGMTLVTPL QLLLFASKKV QSDGQIVLVD DWIKLQISHE  60
   61 AAACITGLRA AMEALVVEVT KQPAIISQLD PVNERMLNMI RQISRPSAAG 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.820 N/A N/A a.71.2 Helical domain of Sec23/24

Predicted Domain #2
Region A:
Residues: [111-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INLMIGSTRY GDGPRPPKMA RYDNGSGYRR GGSSYSGGGY GGGYSSGGYG SGGYGGSANS  60
   61 FRAGYGAGVG GGYRGVSRGG FRGNSGGDYR GPSGGYRGSG GFQRGGGRGA YGTGYFGQGR 120
  121 GGGGY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle