| Protein: | SPO1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 536 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPO1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..536] | [96..631] |
|
|
0.0 | [90..536] | [146..580] |
|
|
0.0 | [90..536] | [151..585] |
|
|
0.0 | [90..536] | [138..567] |
|
|
0.0 | [90..536] | [144..575] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MLVGTGFISQ MNDYGLFEYS DYIAGLSGGS WILMDLVVQN FEVKSLLQEW DLEEDLLLGI 60
61 PEFDISEEEI VTNAKKEYND NDLKMKKRQG GSLITSSSNF YEQIEEIMNS IEEIPEDYMI 120
121 TKRNLNPLAR LKKIFFPNNT FT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.618 | a.24.3 | Cytochromes |
| View | Download | 0.579 | a.24.4 | Hemerythrin |
| View | Download | 0.316 | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.335 | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.284 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.236 | a.126.1 | Serum albumin-like |
| View | Download | 0.235 | d.110.4 | SNARE-like |
| View | Download | 0.232 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.213 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.209 | c.49.1 | Pyruvate kinase, C-terminal domain |
| View | Download | 0.204 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
|
Region A: Residues: [143-301] |
1 11 21 31 41 51
| | | | | |
1 GTDAKIETFK KVLDFYKSLH LKIKPKKMEG FQISFTDYWG KAIVQRLKKN FDDDPNHSFS 60
61 FSKLVNSSKK FKECSVPIPI FVANCKNGLL SNVIFEFTPF EFGSWENILR LFVKLPYLGS 120
121 KIVSGKAEKC INNFDDLGFI TATSSSIFNN VLIFIWNLA
|
| Detection Method: | |
| Confidence: | 3.30103 |
| Match: | 1cjyA_ |
| Description: | Domain from cytosolic phospholipase A2; Cytosolic phospholipase A2 catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [302-536] |
1 11 21 31 41 51
| | | | | |
1 SQSSREAMKA LNMVMGIFGL GKEEIFSISK DSSRLETDYA VYQPNPFYLY PEKDNVLTNK 60
61 NHLYLVDGGE DGENIPLRTL VIPERELDVI FVLDSSSDID NYPNGSKLKR IFEKLDEENV 120
121 HYQFPNNVKT FTHPIVIGCN ATKRTGHDSF LPIIIYHANA NHGNASNTST FKITYNQSEV 180
181 SSMLPTGRGV FSNDYDLYYK NCLGCILTKR TMDRLPRKKK FSPFCLQCFK DYCYS
|
| Detection Method: | |
| Confidence: | 10.23 |
| Match: | 1cjyA |
| Description: | Domain from cytosolic phospholipase A2; Cytosolic phospholipase A2 catalytic domain |
| Matching Structure (courtesy of the PDB): |
|
