| Protein: | APE2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 844 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APE2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..844] | [92..935] |
|
|
0.0 | [3..843] | [64..947] |
|
|
0.0 | [3..843] | [68..949] |
|
|
0.0 | [3..843] | [66..950] |
|
|
0.0 | [3..843] | [65..949] |
|
|
0.0 | [3..843] | [68..950] |
|
Region A: Residues: [1-210] |
1 11 21 31 41 51
| | | | | |
1 MTSKTPNREI LPDNVVPLHY DLTVEPDFKT FKFEGSVKIE LKINNPAIDT VTLNTVDTDI 60
61 HSAKIGDVTS SEIISEEEQQ VTTFAFPKGT MSSFKGNAFL DIKFTGILND NMAGFYRAKY 120
121 EDKLTGETKY MATTQMEPTD ARRAFPCFDE PNLKASFAIT LVSDPSLTHL SNMDVKNEYV 180
181 KDGKKVTLFN TTPKMSTYLV AFIVAELKYV
|
| Detection Method: |  |
| Confidence: | 245.228787 |
| Match: | 1hs6A_ |
| Description: | Leukotriene A4 hydrolase C-terminal domain; Leukotriene A4 hydrolase N-terminal domain; Leukotriene A4 hydrolase catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [211-303] |
1 11 21 31 41 51
| | | | | |
1 ESKNFRIPVR VYATPGNEKH GQFAADLTAK TLAFFEKTFG IQYPLPKMDN VAVHEFSAGA 60
61 MENWGLVTYR VVDLLLDKDN STLDRIQRVA EVV
|
| Detection Method: | |
| Confidence: | 245.228787 |
| Match: | 1hs6A_ |
| Description: | Leukotriene A4 hydrolase C-terminal domain; Leukotriene A4 hydrolase N-terminal domain; Leukotriene A4 hydrolase catalytic domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [304-505] |
1 11 21 31 41 51
| | | | | |
1 QHELAHQWFG NLVTMDWWEG LWLNEGFATW MSWYSCNEFQ PEWKVWEQYV TDTLQHALSL 60
61 DSLRSSHPIE VPVKKADEIN QIFDAISYSK GASLLRMISK WLGEETFIKG VSQYLNKFKY 120
121 GNAKTEDLWD ALADASGKDV RSVMNIWTKK VGFPVISVSE DGNGKITFRQ NRYLSTADVK 180
181 PDEDKTIYPV FLALKTKNGV DS
|
| Detection Method: | |
| Confidence: | 245.228787 |
| Match: | 1hs6A_ |
| Description: | Leukotriene A4 hydrolase C-terminal domain; Leukotriene A4 hydrolase N-terminal domain; Leukotriene A4 hydrolase catalytic domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [506-688] |
1 11 21 31 41 51
| | | | | |
1 SVVLSERSKT IELEDPTFFK VNSEQSGIYI TSYTDERWAK LGQQADLLSV EDRVGLVADV 60
61 KTLSASGYTS TTNFLNLVSK WNNEKSFVVW DQIINSISSM KSTWLFEPKE TQDALDNFTK 120
121 QLISGMTHHL GWEFKSSDSF STQRLKVTMF GAACAARDAD VEKAALKMFT DYCSGNKEAI 180
181 PAL
|
| Detection Method: | |
| Confidence: | 11.01 |
| Match: | 1gw5B |
| Description: | Adaptin beta subunit N-terminal fragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [689-844] |
1 11 21 31 41 51
| | | | | |
1 IKPIVFNTVA RVGGAENYEK VYKIYLDPIS NDEKLAALRS LGRFKEPKLL ERTLGYLFDG 60
61 TVLNQDIYIP MQGMRAHQEG VEALWNWVKK NWDELVKRLP PGLSMLGSVV TLGTSGFTSM 120
121 QKIDEIKKFF ATKSTKGFDQ SLAQSLDTIT SKAQWG
|
| Detection Method: | |
| Confidence: | 11.01 |
| Match: | 1gw5B |
| Description: | Adaptin beta subunit N-terminal fragment |
| Matching Structure (courtesy of the PDB): |
|
