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View Structure Prediction Details

Protein: ASR1
Organism: Saccharomyces cerevisiae
Length: 288 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASR1.

Description E-value Query
Range
Subject
Range
ASR1_YEAST - Alcohol-sensitive RING finger protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=...
ASR1 - Ubiquitin ligase that modifies and regulates RNA Pol II; involved in a putative alcohol-responsive s...
5.0E-41 [1..288] [1..288]
gi|7959351 - gi|7959351|dbj|BAA96066.1| KIAA1542 protein [Homo sapiens]
2.0E-23 [2..255] [111..330]
CG2926-PA - This gene is referred to in FlyBase by the symbol Dmel\CG2926 (CG2926, FBgn0037344). It is a protein...
3.0E-21 [1..224] [152..356]
TRIM3_RAT - Tripartite motif-containing protein 3 OS=Rattus norvegicus GN=Trim3 PE=1 SV=1
3.0E-21 [4..263] [22..287]
TRIM3_MOUSE - Tripartite motif-containing protein 3 OS=Mus musculus GN=Trim3 PE=1 SV=1
3.0E-21 [4..263] [22..287]
ASR1_ASHGO - Alcohol-sensitive RING finger protein 1 OS=Ashbya gossypii GN=ASR1 PE=3 SV=1
ASR1_ASHGO - Alcohol-sensitive RING finger protein 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 99...
3.0E-20 [2..281] [16..323]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEECPICLAD DQEGEQFGCL NVCGHKFHLN CIREWHKYSI NLKCPICRVE STHLEVGEGQ  60
   61 HALSINLKMG FMIKNAIDYV GAETTNERNE DDTGEQD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
binding 2.15523269781888 bayes_pls_golite062009
protein binding 1.2335781397975 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [98-288]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QEIEFLSERL RGTLVMDTIK IIQCSICGDT DVSRLSLYCQ DCEAIYHETC LRGLACEVGD  60
   61 RNTWQECTDC RSNALLELRM GAISSQLASY DSRNSMIFAG ELRDKHSVKT QQMYEQIRNA 120
  121 KHKIQMHVRR ALDRYPLPLL RFKDAYKHVN KQVSRKLYRL SDNKYLPDQY DYDSLARTGV 180
  181 HTELLIYCHD E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [178-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAISSQLASY DSRNSMIFAG ELRDKHSVKT QQMY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [212-288]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EQIRNAKHKI QMHVRRALDR YPLPLLRFKD AYKHVNKQVS RKLYRLSDNK YLPDQYDYDS  60
   61 LARTGVHTEL LIYCHDE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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