| Protein: | PML39 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 334 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PML39.
| Description | E-value | Query Range |
Subject Range |
|
|
719.0 | [0..1] | [334..53] |
|
|
102.0 | [0..6] | [334..9] |
|
|
74.0 | [0..6] | [308..5] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MEKDALEVRL KSIRHSLDKN TKLLPGKYRN TLGERLITKW RYKKKSHNGS SMLPEKCKSH 60
61 VQLYDDLVQE SSKHFVGFRL HDLRALLKRI CSIQNYTRHV LIEWDVRWVN PLTLASKGWE 120
121 PYQSASQSQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.895 | a.29.12 | Description not found. |
| View | Download | 0.790 | a.29.8 | Description not found. |
| View | Download | 0.763 | a.29.14 | Description not found. |
| View | Download | 0.753 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.688 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
|
Region A: Residues: [130-334] |
1 11 21 31 41 51
| | | | | |
1 VPFKCCCCHA IMTIPLLKNG DDVADYTMKL NEKIWNSNII GNHLQKCPWR ENQVDLNKEY 60
61 YLSSQNLIRE IERIHTEIDR IVSGSNEFSL KRNSSRIFHY LSEKEIQKLA FFFDCKDYSL 120
121 VGLLLLGYTK FQKDDLVQCT ACFHRASLKK LEYTEFNGHA LWCRYYNKEL LPTMLLELIG 180
181 KEDKLITKLG VGERLNKLEA VLQTL
|
| Detection Method: | |
| Confidence: | 0.977 |
| Match: | 1oxnA |
| Description: | Structure and Function Analysis of Peptide Antagonists of Melanoma Inhibitor of Apoptosis (ML-IAP) |
Matching Structure (courtesy of the PDB): |
|
