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View Structure Prediction Details

Protein: COG2
Organism: Saccharomyces cerevisiae
Length: 262 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COG2.

Description E-value Query
Range
Subject
Range
COG2 - Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tet...
0.0 [1..262] [14..275]
gi|44980536 - gi|44980536|gb|AAS50469.1| AAR104Wp [Ashbya gossypii ATCC 10895]
gi|45184927, gi|... - gi|45184927|ref|NP_982645.1| AAR104Wp [Ashbya gossypii ATCC 10895], gi|44980536|gb|AAS50469.1| AAR10...
4.0E-91 [10..260] [7..254]

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Predicted Domain #1
Region A:
Residues: [1-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFLNDDELD LDLPVTAEIS KELFATEIEK YRESETNGTD VDNFDVDRFL VQKNFHYLPL  60
   61 DSLIRDLSGL SQKMVQTLLE QIRSNYDDYL TFSNTYTDEE NETLINLEKT QSDLQKFMTQ 120
  121 LDHLIKDDIS NTQEIIKDVL EYLKKLDEIY GSLRNHSQLT EALSLGKRLS KSLHEMCGIE 180
  181 PLEEEICSGL IEQLYKLITA SRRILESCAD SNSPYIHHLR NDYQDLLQEF QISLKILTEK 240
  241 CLENPSSLQN LSLTLVSIIK TA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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