| Protein: | PGD1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 397 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGD1.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-36 | [5..369] | [786..1166] |
|
|
3.0E-34 | [9..381] | [114..492] |
|
|
4.0E-31 | [6..390] | [521..919] |
|
|
5.0E-31 | [5..396] | [785..1196] |
|
|
1.0E-28 | [7..388] | [184..571] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MDSIIPAGVK LDDLQVILAK NENETRDKVC KQINEARDEI LPLRLQFNEF IQIMANIDQE 60
61 GSKQADRMAK YLHIRDKILQ LNDRFQTLSS HLEALQP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [98-255] |
1 11 21 31 41 51
| | | | | |
1 LFSTVPEYLK TADNRDRSFQ LLEPLSTYNK NGNAVCSTAT VVSTNHSAAA STPTTTATPH 60
61 ANPITHAHSL SNPNSTATMQ HNPLAGKRGP KSGSTMGTPT VHNSTAAAPI AAPKKPRKPR 120
121 QTKKAKAQAQ AQAQAQAQVY AQQSTVQTPI TASMAAAL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [256-397] |
1 11 21 31 41 51
| | | | | |
1 PNPTPSMINS VSPTNVMGTP LTNMMSPMGN AYSMGAQNQG GQVSMSQFNG SGNGSNPNTN 60
61 TNSNNTPLQS QLNLNNLTPA NILNMSMNND FQQQQQQQQQ QQQPQPQYNM NMGMNNMNNG 120
121 GKELDSLDLN NLELGGLNMD FL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
