Protein: | PGD1 |
Organism: | Saccharomyces cerevisiae |
Length: | 397 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGD1.
Description | E-value | Query Range |
Subject Range |
|
4.0E-36 | [5..369] | [786..1166] |
|
3.0E-34 | [9..381] | [114..492] |
|
4.0E-31 | [6..390] | [521..919] |
|
5.0E-31 | [5..396] | [785..1196] |
|
1.0E-28 | [7..388] | [184..571] |
Region A: Residues: [1-97] |
1 11 21 31 41 51 | | | | | | 1 MDSIIPAGVK LDDLQVILAK NENETRDKVC KQINEARDEI LPLRLQFNEF IQIMANIDQE 60 61 GSKQADRMAK YLHIRDKILQ LNDRFQTLSS HLEALQP |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [98-255] |
1 11 21 31 41 51 | | | | | | 1 LFSTVPEYLK TADNRDRSFQ LLEPLSTYNK NGNAVCSTAT VVSTNHSAAA STPTTTATPH 60 61 ANPITHAHSL SNPNSTATMQ HNPLAGKRGP KSGSTMGTPT VHNSTAAAPI AAPKKPRKPR 120 121 QTKKAKAQAQ AQAQAQAQVY AQQSTVQTPI TASMAAAL |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [256-397] |
1 11 21 31 41 51 | | | | | | 1 PNPTPSMINS VSPTNVMGTP LTNMMSPMGN AYSMGAQNQG GQVSMSQFNG SGNGSNPNTN 60 61 TNSNNTPLQS QLNLNNLTPA NILNMSMNND FQQQQQQQQQ QQQPQPQYNM NMGMNNMNNG 120 121 GKELDSLDLN NLELGGLNMD FL |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.