| Protein: | VPS72 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 795 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VPS72.
| Description | E-value | Query Range |
Subject Range |
|
|
7.0E-54 | [7..623] | [842..1482] |
|
|
2.0E-52 | [7..623] | [843..1483] |
|
|
3.0E-52 | [7..619] | [845..1481] |
|
|
4.0E-52 | [7..619] | [846..1482] |
|
|
8.0E-52 | [7..619] | [847..1483] |
|
|
4.0E-51 | [7..623] | [841..1481] |
|
Region A: Residues: [1-365] |
1 11 21 31 41 51
| | | | | |
1 MSDEGADKSL DTNTEFIIQT RSRRSNAGNK LQKLLEQELR DIESTKRQIS SYKNGNDDEE 60
61 DEIGLLFQED EDDEDFEMMA KDDDDEGEEK EDETQSIRKE PSQASSEQAA DDLMFSSSES 120
121 EDSSNENDED AEEKEIRRQE LLSRKKRNKR LQKGPVVIKK QKPKPKSGEA IPRSHHTHEQ 180
181 LNAETLLLNT RRTSKRSSVM ENTMKVYEKL SKAEKKRKII QERIRKHKEQ ESQHMLTQEE 240
241 RLRIAKETEK LNILSLDKFK EQEVWKKENR LALQKRQKQK FQPNETILQF LSTAWLMTPA 300
301 MELEDRKYWQ EQLNKRDKKK KKYPRKPKKN LNLGKQDASD DKKRESEESI KNDGDVNSLG 360
361 ENSSS
|
| Detection Method: |  |
| Confidence: | 25.69897 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [366-623] |
1 11 21 31 41 51
| | | | | |
1 VHNQKRIEET STNDTVEGES SPDAAVSRVN SDELKPTALP DVTLDAIANK QSTVDEAPNS 60
61 QPQKNIITNE QKITNVGEPI QNLHNEEIKD EMVSALESRE NTFENSSPAA QVVSQRDNSA 120
121 TPTPSNSTGT EDTILISPDT DIKGEPEPCL KTEGIENLSH NVPQETKSNT DVSFLKQVTF 180
181 TDHPQVAIID TEESPSKKDT ANVDESSAEN SLSTQTYEGP EQLTSRNFVT LYDFPNAPPN 240
241 LKDFNTNLFG DRWSYTNG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [624-795] |
1 11 21 31 41 51
| | | | | |
1 LSATQRPQDM KTVFHSILPS PPQSSVPSPT VDISLDLSAL ANFPSFGEYD KKIVHQINTE 60
61 INKDLEIKIK TQPPTGVFLA NGIRKKCLIT NKECQYFDPR TGVPYSDVEA YKIIQRIQDP 120
121 ISKEEGRSDI KRDETTNEDS DDQVRFKWFG FKNGGIYLDL SQRPAKGVPE GF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
