| Protein: | SWC3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 625 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SWC3.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-48 | [2..575] | [525..1096] |
|
|
1.0E-47 | [2..433] | [547..1009] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MPAVLRTRSK ESSIEQKPAS RTRTRSRRGK RGRDDDDDDD DEESDDAYDE VGNDYDEYAS 60
61 RAKLATNRPF EIVAGLPASV ELPNYNSSLT HPQSIKNSGV LYDSLVSSRR TWVQGEMFEL 120
121 YWRRPKKIVS ESTPAATESP TS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [143-314] |
1 11 21 31 41 51
| | | | | |
1 GTIPLIRDKM QKMCDCVMSG GPHTFKVRLF ILKNDKIEQK WQDEQELKKK EKELKRKNDA 60
61 EAKRLRMEER KRQQMQKKIA KEQKLQLQKE NKAKQKLEQE ALKLKRKEEM KKLKEQNKNK 120
121 QGSPSSSMHD PRMIMNLNLM AQEDPKLNTL METVAKGLAN NSQLEEFKKF IE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [315-625] |
1 11 21 31 41 51
| | | | | |
1 IAKKRSLEEN PVNKRPSVTT TRPAPPSKAK DVAEDHRLNS ITLVKSSKTA ATEPEPKKAD 60
61 DENAEKQQSK EAKTTAESTQ VDVKKEEEDV KEKGVKSEDT QKKEDNQVVP KRKRRKNAIK 120
121 EDKDMQLTAF QQKYVQGAEI ILEYLEFTHS RYYLPKKSVV EFLEDTDEII ISWIVIHNSK 180
181 EIEKFKTKKI KAKLKADQKL NKEDAKPGSD VEKEVSFNPL FEADCPTPLY TPMTMKLSGI 240
241 HKRFNQIIRN SVSPMEEVVK EMEKILQIGT RLSGYNLWYQ LDGYDDEALS ESLRFELNEW 300
301 EHAMRSRRHK R
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
