| Protein: | ATG13 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 738 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG13.
| Description | E-value | Query Range |
Subject Range |
|
|
450.0 | [0..10] | [470..39] |
|
|
372.0 | [0..10] | [737..8] |
|
|
338.0 | [0..248] | [577..373] |
|
|
325.0 | [0..4] | [437..62] |
|
|
311.0 | [0..8] | [431..11] |
|
|
302.0 | [0..9] | [434..13] |
|
|
281.0 | [0..9] | [459..11] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MVAEEDIEKQ VLQLIDSFFL KTTLLICSTE SSRYQSSTEN IFLFDDTWFE DHSELVSELP 60
61 EIISKWSHYD GRKELPPLVV ETYLDLRQLN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [91-244] |
1 11 21 31 41 51
| | | | | |
1 SSHLVRLKDH EGHLWNVCKG TKKQEIVMER WLIELDNSSP TFKSYSEDET DVNELSKQLV 60
61 LLFRYLLTLI QLLPTTELYQ LLIKSYNGPQ NEGSSNPITS TGPLVSIRTC VLDGSKPILS 120
121 KGRIGLSKPI INTYSNALNE SNLPAHLDQK KITP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [245-600] |
1 11 21 31 41 51
| | | | | |
1 VWTKFGLLRV SVSYRRDWKF EINNTNDELF SARHASVSHN SQGPQNQPEQ EGQSDQDIGK 60
61 RQPQFQQQQQ PQQQQQQQQQ QQRQHQVQTQ QQRQIPDRRS LSLSPCTRAN SFEPQSWQKK 120
121 VYPISRPVQP FKVGSIGSQS ASRNPSNSSF FNQPPVHRPS MSSNYGPQMN IEGTSVGSTS 180
181 KYSSSFGNIR RHSSVKTTEN AEKVSKAVKS PLQPQESQED LMDFVKLLEE KPDLTIKKTS 240
241 GNNPPNINIS DSLIRYQNLK PSNDLLSEDL SVSLSMDPNH TYHRGRSDSH SPLPSISPSM 300
301 HYGSLNSRMS QGANASHLIA RGGGNSSTSA LNSRRNSLDK SSNKQGMSGL PPIFGG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [601-738] |
1 11 21 31 41 51
| | | | | |
1 ESTSYHHDNK IQKYNQLGVE EDDDDENDRL LNQMGNSATK FKSSISPRSI DSISSSFIKS 60
61 RIPIRQPYHY SQPTTAPFQA QAKFHKPANK LIDNGNRSNS NNNNHNGNDA VGVMHNDEDD 120
121 QDDDLVFFMS DMNLSKEG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
