| Protein: | MMS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1407 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MMS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1407] | [1..1407] |
|
Region A: Residues: [1-1407] |
1 11 21 31 41 51
| | | | | |
1 MLGLRTHGLD RYEHYIRRPS DFGKLELQDW LNHKSFRVSP NLLIDSSTTR EWNEPELFYQ 60
61 NTEDETWVRP CVGPKLEPSM MMLRYHDSNI GQMPQFCYPI SSPINFKPVL KYILQERSEL 120
121 SDGFPQKYNT LIGSLFDIDK NPETLDDSDI EALDDIEMSS DSGNVKEPKI ELQALEEIQQ 180
181 KHFSLIVSNN GIFQTGSTSI TYIQSGISGS IAIKPNNVAI LILLTQPSGH LLSILPLDDG 240
241 KETYLLQYWN LGQKGQWNII KHQNEKQFVL IHKELGICKF FEFHLPFTFQ LVNNLTLTDS 300
301 VIMNGSFFPT NYTDLDPYFI IFITAIRYER IVYFVIEWNN NEIKKKEVYQ LTVFDGEKTN 360
361 MTIPIGLNAC LVETPLKFSL VSANQIMSGE TEFHSFQLKA LKGIKSFFPA PLLLLKLQEL 420
421 HPHTFKKFQY CTIISSSTGN ICFCVTERST IVNGNLKFYE LTRFKGLKSI SPLPSNPINL 480
481 DSRSSSYVLV VISFSRTLEL TLSLEDLRCL DKKDVIKPLK NITFKHTIDS STEENSQILA 540
541 FTSSKFYNTH TGSNINDTRN SQVWLTSPNA ITQPCIDYKL RKTHQLIHLK QFQIFRHLRI 600
601 WKCKNLDIAL LQRLGINQSN TESSLIFATD AVSNNRIFLL DLTMTTTIDN DDPVQGLINI 660
661 EDLLCDTENE TILLNFTKNN LIQVTRDTIY IDPIGGDKEL RKISPGWEFE NVTYNDGILI 720
721 VWNAGLGCVS YIENIDAVDE SGALVSNLSS SKGMSKFFKQ LGTVTSVNFQ IKESTDDPTK 780
781 YDIWILLPDC VIRTPFSDWI SDSLDFSDVY ILSVQQALIN GPYFCSLDYE SYFEVHTLQN 840
841 NCFKKGSRCT SRVNFQGKDI KFRSFGVNQC LAFSAFEIFV INLTPIHDSR ELDFYKLKLP 900
901 HLGNNNSILE VCPDIENNQL FILYSDGLRI LELSYLTSNN GNFLLKSTRS KNKKFLYLDK 960
961 INRMLVLNQD LREWECIRLS DGKAVGLDSQ LLKDDSEEIL EIKELPIATE DNPLEKKTVL1020
1021 LISFTSSLKL VLLTAAKNKI SNQIIDSYKL DNSRLLNHLV ITPRGEIFFL DYKVMGTDNE1080
1081 MSFNKLKVTK HCIDQEERNN TTLRLTLETR FTFKSWSTVK TFTVVGDNII ATTNMGEKLY1140
1141 LIKDFSSSSD ESRRVYPLEM YPDSKVQKII PLNECCFVVA AYCGNRNDLD SRLIFYSLPT1200
1201 IKVGLNNETG SLPDEYGNGR VDDIFEVDFP EGFQFGTMAL YDVLHGERHV NRYSEGIRSE1260
1261 NDEAEVALRQ RRNLLLFWRN HSSTPKPSLR RAATIVYEDH VSSRYFEDIS SILGSTAMRT1320
1321 KRLSPYNAVA LDKPIQDISY DPAVQTLYVL MADQTIHKFG KDRLPCQDEY EPRWNSGYLV1380
1381 SRRSIVKSDL ICEVGLWNLS DNCKNTV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [140-252] |
1 11 21 31 41 51
| | | | | |
1 KNPETLDDSD IEALDDIEMS SDSGNVKEPK IELQALEEIQ QKHFSLIVSN NGIFQTGSTS 60
61 ITYIQSGISG SIAIKPNNVA ILILLTQPSG HLLSILPLDD GKETYLLQYW NLG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [253-480] |
1 11 21 31 41 51
| | | | | |
1 QKGQWNIIKH QNEKQFVLIH KELGICKFFE FHLPFTFQLV NNLTLTDSVI MNGSFFPTNY 60
61 TDLDPYFIIF ITAIRYERIV YFVIEWNNNE IKKKEVYQLT VFDGEKTNMT IPIGLNACLV 120
121 ETPLKFSLVS ANQIMSGETE FHSFQLKALK GIKSFFPAPL LLLKLQELHP HTFKKFQYCT 180
181 IISSSTGNIC FCVTERSTIV NGNLKFYELT RFKGLKSISP LPSNPINL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [481-551] |
1 11 21 31 41 51
| | | | | |
1 DSRSSSYVLV VISFSRTLEL TLSLEDLRCL DKKDVIKPLK NITFKHTIDS STEENSQILA 60
61 FTSSKFYNTH T
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [552-705] |
1 11 21 31 41 51
| | | | | |
1 GSNINDTRNS QVWLTSPNAI TQPCIDYKLR KTHQLIHLKQ FQIFRHLRIW KCKNLDIALL 60
61 QRLGINQSNT ESSLIFATDA VSNNRIFLLD LTMTTTIDND DPVQGLINIE DLLCDTENET 120
121 ILLNFTKNNL IQVTRDTIYI DPIGGDKELR KISP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [706-857] |
1 11 21 31 41 51
| | | | | |
1 GWEFENVTYN DGILIVWNAG LGCVSYIENI DAVDESGALV SNLSSSKGMS KFFKQLGTVT 60
61 SVNFQIKEST DDPTKYDIWI LLPDCVIRTP FSDWISDSLD FSDVYILSVQ QALINGPYFC 120
121 SLDYESYFEV HTLQNNCFKK GSRCTSRVNF QG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [858-1061] |
1 11 21 31 41 51
| | | | | |
1 KDIKFRSFGV NQCLAFSAFE IFVINLTPIH DSRELDFYKL KLPHLGNNNS ILEVCPDIEN 60
61 NQLFILYSDG LRILELSYLT SNNGNFLLKS TRSKNKKFLY LDKINRMLVL NQDLREWECI 120
121 RLSDGKAVGL DSQLLKDDSE EILEIKELPI ATEDNPLEKK TVLLISFTSS LKLVLLTAAK 180
181 NKISNQIIDS YKLDNSRLLN HLVI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1062-1210] |
1 11 21 31 41 51
| | | | | |
1 TPRGEIFFLD YKVMGTDNEM SFNKLKVTKH CIDQEERNNT TLRLTLETRF TFKSWSTVKT 60
61 FTVVGDNIIA TTNMGEKLYL IKDFSSSSDE SRRVYPLEMY PDSKVQKIIP LNECCFVVAA 120
121 YCGNRNDLDS RLIFYSLPTI KVGLNNETG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1211-1407] |
1 11 21 31 41 51
| | | | | |
1 SLPDEYGNGR VDDIFEVDFP EGFQFGTMAL YDVLHGERHV NRYSEGIRSE NDEAEVALRQ 60
61 RRNLLLFWRN HSSTPKPSLR RAATIVYEDH VSSRYFEDIS SILGSTAMRT KRLSPYNAVA 120
121 LDKPIQDISY DPAVQTLYVL MADQTIHKFG KDRLPCQDEY EPRWNSGYLV SRRSIVKSDL 180
181 ICEVGLWNLS DNCKNTV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
