| Protein: | TPO3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 622 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPO3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..622] | [1..622] |
|
|
0.0 | [5..575] | [416..1015] |
|
|
0.0 | [11..619] | [4..610] |
|
|
0.0 | [108..619] | [3..526] |
|
|
0.0 | [30..610] | [2..594] |
|
|
0.0 | [94..618] | [22..547] |
|
Region A: Residues: [1-163] |
1 11 21 31 41 51
| | | | | |
1 MNRQESINSF NSDETSSLSD VESQQPQQYI PSESGSKSNM APNQLKLTRT ETVKSLQDMG 60
61 VSSKAPVPDV NAPQSSKNKI FPEEYTLETP TGLVPVATLH SIGRTSTAIS RTRTRQIDGA 120
121 SSPSSNEDAL ESDNNEKGKE GDSSGANDEA PDLDPEIEFV TFV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [164-622] |
1 11 21 31 41 51
| | | | | |
1 TGDPENPHNW PAWIRWSYTV LLSILVICVA YGSACISGGL GTVEKKYHVG MEAAILSVSL 60
61 MVIGFSLGPL IWSPVSDLYG RRVAYFVSMG LYVIFNIPCA LAPNLGSLLA CRFLCGVWSS 120
121 SGLCLVGGSI ADMFPSETRG KAIAFFAFAP YVGPVVGPLV NGFISVSTGR MDLIFWVNMA 180
181 FAGVMWIISS AIPETYAPVI LKRKAARLRK ETGNPKIMTE QEAQGVSMGE MMRACLLRPL 240
241 YFSVTEPVLV ATCFYVCLIY SLLYAFFFAF PVIFGELYGY KDNLVGLMFI PIVIGALWAL 300
301 ATTFYCENKY LQIVKQRKPT PEDRLLGAKI GAPFAAIALW ILGATAYKHI IWVGPASAGL 360
361 AFGFGMVLIY YSLNNYIIDC YVQYASSALA TKVFLRSAGG AAFPLFTIQM YHKLNLHWGS 420
421 WLLAFISTAM IALPFAFSYW GKGLRHKLSK KDYSIDSIE
|
| Detection Method: | |
| Confidence: | 5.366532 |
| Match: | PF00083 |
| Description: | Sugar (and other) transporter |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.3181781780038 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 1.24937104052238 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
