| Protein: | NOC4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 552 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NOC4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..552] | [1..552] |
|
|
0.0 | [4..534] | [16..562] |
|
|
0.0 | [6..523] | [9..495] |
|
|
0.0 | [7..523] | [10..495] |
|
|
0.0 | [3..529] | [4..482] |
|
|
0.0 | [8..527] | [2..475] |
|
|
7.0E-88 | [32..525] | [232..754] |
|
Region A: Residues: [1-425] |
1 11 21 31 41 51
| | | | | |
1 MVLLISEIKD IAKRLTAAGD RKQYNSIIKL INELVIPENV TQLEEDETEK NLRFLVMSLF 60
61 QIFRKLFSRG DLTLPSSKKS TLEKEQFVNW CRKVYEAFKT KLLAIISDIP FETSLGLDSL 120
121 DVYLQLAELE STHFASEKGA PFFPNKTFRK LIIALWSSNM GEIEDVKSSG ASENLIIVEF 180
181 TEKYYTKFAD IQYYFQSEFN QLLEDPAYQD LLLKNVGKWL ALVNHDKHCS SVDADLEIFV 240
241 PNPPQAIENE SKFKSNFEKN WLSLLNGQLS LQQYKSILLI LHKRIIPHFH TPTKLMDFLT 300
301 DSYNLQSSNK NAGVVPILAL NGLFELMKRF NLEYPNFYMK LYQIINPDLM HVKYRARFFR 360
361 LMDVFLSSTH LSAHLVASFI KKLARLTLES PPSAIVTVIP FIYNLIRKHP NCMIMLHNPA 420
421 FISNP
|
| Detection Method: |  |
| Confidence: | 9.09 |
| Match: | 1b3uA_ |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [426-552] |
1 11 21 31 41 51
| | | | | |
1 FQTPDQVANL KTLKENYVDP FDVHESDPEL THALDSSLWE LASLMEHYHP NVATLAKIFA 60
61 QPFKKLSYNM EDFLDWNYDS LLNAESSRKL KTLPTLEFEA FTNVFDNEDG DSEASSQGNV 120
121 YLPGVAW
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.440 | a.1.1 | Globin-like |
| View | Download | 0.444 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.228 | d.82.2 | Frataxin-like |
| View | Download | 0.237 | a.1.1 | Globin-like |
| View | Download | 0.214 | a.74.1 | Cyclin-like |
| View | Download | 0.202 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.201 | a.24.15 | FAD-dependent thiol oxidase |
