| Protein: | ISR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 443 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ISR1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [9..433] | [121..538] |
|
|
0.0 | [9..435] | [131..539] |
|
|
0.0 | [9..433] | [121..538] |
|
|
0.0 | [9..434] | [112..522] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MNSTPPTSPV TRVSDGSFPS ISNNSKGFAY RQPQKHKSNF AYSHLVSPVE EPTAKFSEAF 60
61 QTDYSSKAPV ATSEAH
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [77-232] |
1 11 21 31 41 51
| | | | | |
1 LKNDLDVLFT TPRFYSPENL ALMFRLSNTV SSLEFLDEFL MGILLAPEMD FLSNPSYSLP 60
61 SNKLVGQGSY SYVYPISSSA SSRCNNDSGV VLKFAKSQHK SKVILQEALT LAYLQYMSPS 120
121 TNESHIIPFY GLTYITKSHF RRLRSNECVP GLILPK
|
| Detection Method: | |
| Confidence: | 108.0 |
| Match: | 1f3mC_ |
| Description: | pak1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [233-443] |
1 11 21 31 41 51
| | | | | |
1 CEMSLYHFNT AVSHKLSLIT KRKIWWRLMK QMIDALKSLK TNGIIHGDIK TANILITEMH 60
61 VLNGGHCKDF DFYLADFTSA FHINQTPTDL NTTVEYCAPE LIDSSSDHVP TFESDLYAVG 120
121 LCLLSFISQH EPYNELQALV SHGSSPGIGS SSIQQSQWLI NALLKKDPIN LNMLRNDLFQ 180
181 DWKSELALLS RILVDRLPLE NLITILDSNY I
|
| Detection Method: | |
| Confidence: | 108.0 |
| Match: | 1f3mC_ |
| Description: | pak1 |
| Matching Structure (courtesy of the PDB): |
|
