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View Structure Prediction Details

Protein: YPR091C
Organism: Saccharomyces cerevisiae
Length: 770 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPR091C.

Description E-value Query
Range
Subject
Range
YPR091C - Putative protein of unknown function; may interact with ribosomes, based on co-purification experime...
YP091_YEAST - Uncharacterized PH domain-containing protein YPR091C OS=Saccharomyces cerevisiae (strain ATCC 204508...
0.0 [1..770] [1..770]
gi|85112049 - gi|85112049|ref|XP_964231.1| hypothetical protein NCU01947 [Neurospora crassa OR74A]
gi|28926004, gi|... - gi|32417318|ref|XP_329137.1| hypothetical protein [Neurospora crassa], gi|28926004|gb|EAA34995.1| co...
0.0 [3..718] [2..642]
CE32837 - WBGene00008274 status:Partially_confirmed TR:Q9U3L2 protein_id:CAB54213.2
5.0E-90 [277..704] [39..478]
SPBC23G7.06c - conserved eukaryotic protein
gi|19112656 - gi|19112656|ref|NP_595864.1| hypothetical protein SPBC23G7.06c [Schizosaccharomyces pombe 972h-]
6.0E-77 [301..693] [204..586]
CG10362-PA - This gene is referred to in FlyBase by the symbol Dmel\CG10362 (CG10362, FBgn0030358). It is a prote...
1.0E-64 [284..681] [59..481]
gi|8388621, gi|7... - gi|8388621|emb|CAB94141.1| CaLB protein [Arabidopsis thaliana], gi|79315898|ref|NP_001030908.1| NTMC...
5.0E-51 [277..556] [18..309]

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Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLKVFLAV YLLGGITFLP LVLFTLYKIH LLYSNLKSAS KKELDHDTAD EIDEKTRLLA  60
   61 RDIDPEFKAR KLEEQLGVKV FNKGWITVTK QYYYHSSEVA VILKNSNNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.734 a.24.9 alpha-catenin/vinculin
View Download 0.690 a.7.7 BAG domain
View Download 0.734 a.24.1 Apolipoprotein
View Download 0.734 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.614 a.130.1 Chorismate mutase II
View Download 0.564 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.539 a.4.5 "Winged helix" DNA-binding domain
View Download 0.525 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.474 f.17.1 F1F0 ATP synthase subunit C
View Download 0.465 a.7.1 Spectrin repeat
View Download 0.463 d.24.1 Pili subunits
View Download 0.458 c.49.1 Pyruvate kinase, C-terminal domain
View Download 0.450 d.75.2 DNA repair protein MutS, domain I
View Download 0.440 a.72.1 Functional domain of the splicing factor Prp18
View Download 0.426 a.24.17 Group V grass pollen allergen
View Download 0.421 a.4.6 C-terminal effector domain of the bipartite response regulators
View Download 0.421 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.418 a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.408 a.7.5 Tubulin chaperone cofactor A
View Download 0.384 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.383 a.1.1 Globin-like
View Download 0.378 b.40.4 Nucleic acid-binding proteins
View Download 0.378 a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.372 a.22.1 Histone-fold
View Download 0.363 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.352 a.7.8 GAT domain
View Download 0.347 a.24.9 alpha-catenin/vinculin
View Download 0.344 a.118.1 ARM repeat
View Download 0.335 f.14.1 Voltage-gated potassium channels
View Download 0.328 a.7.6 Ribosomal protein S20
View Download 0.323 f.31.1 Photosystem I reaction center subunit XI, PsaL
View Download 0.317 a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.316 a.24.14 FAT domain of focal adhesion kinase
View Download 0.312 d.96.1 Tetrahydrobiopterin biosynthesis enzymes-like
View Download 0.310 a.7.7 BAG domain
View Download 0.309 a.16.1 S15/NS1 RNA-binding domain
View Download 0.307 a.47.2 t-snare proteins
View Download 0.301 a.24.3 Cytochromes
View Download 0.292 a.8.2 Plasmid maintenance system epsilon/zeta, antidote epsilon subunit
View Download 0.286 f.13.1 Family A G protein-coupled receptor-like
View Download 0.285 a.4.5 "Winged helix" DNA-binding domain
View Download 0.280 a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.278 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.273 c.59.1 MurD-like peptide ligases, peptide-binding domain
View Download 0.271 a.7.5 Tubulin chaperone cofactor A
View Download 0.264 a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.263 d.52.2 GMP synthetase C-terminal dimerisation domain
View Download 0.258 a.74.1 Cyclin-like
View Download 0.256 d.81.1 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
View Download 0.247 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.243 a.11.1 Acyl-CoA binding protein
View Download 0.241 a.66.1 Transducin (alpha subunit), insertion domain
View Download 0.239 f.32.1 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
View Download 0.237 a.145.1 Flagellar transcriptional activator FlhD
View Download 0.228 a.73.1 Retrovirus capsid protein, N-terminal core domain
View Download 0.227 a.2.11 Fe,Mn superoxide dismutase (SOD), N-terminal domain
View Download 0.226 f.18.1 F1F0 ATP synthase subunit A
View Download 0.224 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.223 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.222 c.26.3 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
View Download 0.216 a.60.9 lambda integrase-like, N-terminal domain
View Download 0.206 d.122.1 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
View Download 0.201 a.28.1 ACP-like
View Download 0.200 a.4.5 "Winged helix" DNA-binding domain

Predicted Domain #2
Region A:
Residues: [110-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDSDTALQEQ ILQRTDLKKK QRFFAVLRHG NLFLYKDDSQ NANLVHAISL QNRFITIWPR  60
   61 FDELGKEELP DASLFTKRTC IAIFKNDLVS IDSKNHNVIL PHFDPLTSAE SNNGDISTND 120
  121 TTHEYQSQFH SSNQFFLYFD NNMDKEDWYY QLINASKN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 7.309804
Match: PF00169
Description: PH domain

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [268-591]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNSLSTGLLD PNVSANAAHL KTKDMLQLIQ DINSTENQLT TKWLNALLGR LFLSLQQTDT  60
   61 LNKFIHEKIC KKLNKIKTPG FLDDLVVEKV DVGDSAPLFT SPELLELSPE GSTKIAIDVQ 120
  121 YRGNLTIIIA TKASINLGSR FKQREVSLQL SIKIKEFSGP LLFLIKPPPS NRIWYAFRTE 180
  181 PIMDFEIEPI VSSSKLSYNV VTNAIKSKFA EAVKESLVVP FMDDIVFYPT PNEVYRGGIW 240
  241 EEQDPEAAAR ARTAAAASDM NNTSAKEHLE ALQEGGMKTQ SRIKKALRPE RKKENLKDLV 300
  301 DASGVATKTT TQTTVTTATN DDVS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [592-770]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSENSTKSRK YFKNSIKKIG RWYKDNVGNS SDTEDMDEID VQDKKNDDSA DERESDNPIL  60
   61 TSNPKMISNR RPVPRRPSQP LNTLSPKLEG RKEKDTENFP VPPSASNMNA SKMFANKENR 120
  121 KFSVSSNDSQ NSLKNGDPHV KASKLESSQA FVKKTSQNRF NDGFFKQDLE FEEQREPKL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle