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View Structure Prediction Details

Protein: MCM16
Organism: Saccharomyces cerevisiae
Length: 181 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCM16.

Description E-value Query
Range
Subject
Range
MCM16 - Protein involved in kinetochore-microtubule mediated chromosome segregation; binds to centromere DNA
MCM16_YEAST - Central kinetochore subunit MCM16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MCM16 ...
gi|151942833 - gi|151942833|gb|EDN61179.1| minichromosome maintenance-related protein [Saccharomyces cerevisiae YJM...
3.0E-85 [1..181] [1..181]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNSSEKQWE RIQQLEKEHV EVYRELLITL DRLYLIRKHN HAVILSHTQQ RLLEIRHQLQ  60
   61 INLEKTALLI RLLEKPDNTN VLFTKLQNLL EESNSLDYEL LQSLGAQSSL HKQLIESRAE 120
  121 RDELMSKLIE LSSKFPKPTI PPDDSDTAGK QVEVEKENET IQELMIALQI HSGYTNISYT 180
  181 I

[Run NCBI BLAST on this sequence.]

Detection Method: Pcons
Confidence: 1.88
Match: 1bgd_
Description: Granulocyte-colony stimulating factor (G-CSF)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle