| Protein: | CSR2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1121 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSR2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1121] | [1..1121] |
|
|
1.0E-80 | [299..704] | [23..423] |
|
|
2.0E-73 | [487..813] | [10..348] |
|
|
2.0E-68 | [229..579] | [62..374] |
|
|
7.0E-64 | [270..548] | [212..505] |
|
Region A: Residues: [1-268] |
1 11 21 31 41 51
| | | | | |
1 MQSTVPIAIA SNGNKRDVVQ NVSAGDEGDI LQRLARNREM ISTSLSPQKS SGFSGRRRSS 60
61 SVRDALSSFF GTGNSPTSSM DDYSNLMNRN YSTASTAMCR GNSFPSDVGT KAYNITGSYQ 120
121 PDRHRNSVPY TTIDQLHTRQ DTGLRRESDP VAAKQISSNN DIVRSFITHH ASNSTMFINR 180
181 VLSDYLADRG FIKQTPLYNK KSVLEISIAT SAESVFLPTT KSDETEYLSL IHGSLNQART 240
241 QPVGSTNTAE SDFLPSCPTM DTLNENND
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [269-549] |
1 11 21 31 41 51
| | | | | |
1 LSLFPLHTQR TSPSNTARTG NAMDTSNSDR ASPASNNNTT DADSFVASGN NNPMNNNNSP 60
61 ARNRHPNSHS RSLPNAWNSQ MPSFSFALIF SLNKSTTLSD IKVELTSNVR VVWFNGLPPT 120
121 KNVNEECYNI GSLDWTLNAD NFNLFIPQGA KSPLDIVENH SNNRKLKVLQ KLSMRKRRSF 180
181 SNKAVLRENI LNNLNASNST NKLNAGVYVF TIPIVLASRI PESLYYPSAR VSYSLRLATK 240
241 LKDEHTQLVA SRPRSSSISS PQKLRSYSCS DSYEYSQIDD T
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [550-791] |
1 11 21 31 41 51
| | | | | |
1 IEGETYNNDK NSTGKIAFPS SWLKSAKGRL KRNNSNGRSD NNGASSSGLA MQHDSEDTIN 60
61 LQYPLNLVRT PPEISVTTAN KPLYINKVWE NCLSYEISFA QKYVPLNGEI PITIKVAPLV 120
121 KSLSVKRIRV SCREKISYRS KDYQYDFDQL DPLASDPCNP YHMRYLVRKK KDRSLPLFEV 180
181 ASKCTSGPSI REEVVTNTVD DNLLAYTSSK ENNKDIPFSE SFTVKTKLKF PKYCEVDATK 240
241 AA
|
| Detection Method: | |
| Confidence: | 28.0 |
| Match: | 1g4mA_ |
| Description: | Arrestin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.65544526722793 | bayes_pls_golite062009 |
| protein binding | 1.50286160643298 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.24498703916422 | bayes_pls_golite062009 |
| actin binding | 0.15943777627145 | bayes_pls_golite062009 |
|
Region A: Residues: [792-1121] |
1 11 21 31 41 51
| | | | | |
1 SLPPYGIDLF DPIKDPTQSE NTSNNGNVLG FLVGRPNRAS KTVHKIPQDK NHNEVNDTNG 60
61 NSNTSLQTSS NVPIQHYTRL NKPRRGLYLD SMHFKNIQCS HKLEIVLRVS KTDSGSSKII 120
121 RHYEVIVDTP IYLISDLCNT SNIDLPTYDM ATTESSKVLP PTFEEATSVS ASPRSSVSYY 180
181 PDDISMQQLN LSRSTSLANG YLSTLHPKTT AVSDSSNGAP IRDQQEQQAR PLRTEDYALQ 240
241 MGNENNAYSN MDGLLSQDIF EQETAATLFK RDIVTMNFNN NIFTPRYSPR TFTNTDYNYN 300
301 DNDNNDNDTE GPGPIIHPGP EPPRYDEISS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
