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View Structure Prediction Details

Protein: HAL1
Organism: Saccharomyces cerevisiae
Length: 294 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HAL1.

Description E-value Query
Range
Subject
Range
HAL1 - Cytoplasmic protein involved in halotolerance; decreases intracellular Na+ (via Ena1p) and increases...
HAL1_YEAST - Halotolerance protein HAL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HAL1 PE=1 SV=...
0.0 [1..294] [1..294]

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Predicted Domain #1
Region A:
Residues: [1-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFKDLGLHD YTLKNLMYEN NCCKFYDAVD ENNISYVLKF VPSDVTSEGD TFPFVDRFQV  60
   61 KEGVFLVYSS NDFGKEGTDY FTYTGSGGNE VHISGTSSEA GIKPQFIETC HPKHLKRGTK 120
  121 EQEDINSSTS KKSAVINNFS GEKTPNPRPQ SSNISERETY VGILNVKCKN KNSSKIRSEK 180
  181 LVSSVIETKH TPGLASILSK EGTTYPNNAD GKHISIVNPS SKIYHSSHKQ IVKTPIPKSG 240
  241 LSPIERCPFN GQNIKCYSPR PLDHESPQRD FNNNFQLRIL KSSVLQRRQS TQNS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle