Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPR003C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [32..714] | [5..653] |
|
|
0.0 | [32..714] | [4..657] |
|
|
0.0 | [1..754] | [1..754] |
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0.0 | [32..714] | [4..657] |
|
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0.0 | [32..714] | [4..657] |
|
|
0.0 | [32..714] | [4..655] |
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|
0.0 | [32..714] | [4..655] |
|
|
0.0 | [35..716] | [4..650] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MTSNNSLLGR GRMSYSSTAP PRFKRSVDQR DTFSDNFDYD KDSSNRGRTY IAASNSTTGV 60
61 PPPNNSRSGC TNNTNNTNNT SNTSNTNNND
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [91-195] |
1 11 21 31 41 51
| | | | | |
1 SVDENTVFET LPYYLPCFSW LPEYTFNKLW GDVIAGISVA SFQIPLALSY TTSIAHVPPL 60
61 CGLYSLAISP FVYGILGSVP QMIVGPESAI SLVVGQAVES ITLHK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.994 | N/A | N/A | a.24.4 | Hemerythrin |
|
Region A: Residues: [196-554] |
1 11 21 31 41 51
| | | | | |
1 ENVSLIDIST VITFVSGTIL LFSGISRFGF LGNVLSKALL RGFISSVGLV MIINSLISEL 60
61 KLDKFLVSLP QHYHTPFEKI LFLIDYAPAQ YHIPTAIFSG CCLIVLFLTR LLKRKLMKYH 120
121 KSAIFFPDIL LVVIVTILIS MKFNLKHRYG ISIIGDFSMD NFDELKNPLT RPRRKLIPDL 180
181 FSASLIVAML GFFESTTASK SLGTTYNLTV SSNRELVALG FMNIVISLFG ALPAFGGYGR 240
241 SKINALSGAQ SVMSGVFMGV ITLITMNLLL QFVHYIPNCV LSVITTIIGI SLLEEVPGDI 300
301 KFHLRCGGFS ELFVFAVTFC TTIFYSIEAG ICIGCVYSII NIIKHSAKSR IQILARVAG
|
| Detection Method: | |
| Confidence: | 112.05061 |
| Match: | PF00916 |
| Description: | Sulfate transporter family |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [555-613] |
1 11 21 31 41 51
| | | | | |
1 TSNFTNLDDY MMNMKRNSLD VEGTEEIEGC MIVRIPEPLT FTNSEDLKQR LDRIERYGS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [614-754] |
1 11 21 31 41 51
| | | | | |
1 SKIHPGRKSL RSKDSIKYVI FDLGGMTSID SSAAQVLEEI ITSYKRRNVF IYLVNVSIND 60
61 KVRRRLFKAG VAASVERAQA NNNENNTSNT FSDAGETYSP YFDSIDAALY EIEKMKIKGN 120
121 NVPNNDSESF MSNTLFNSSL V
|
| Detection Method: | |
| Confidence: | 3.0 |
| Match: | 1auz__ |
| Description: | Anti-sigma factor antagonist SpoIIaa |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [578-754] |
1 11 21 31 41 51
| | | | | |
1 TEEIEGCMIV RIPEPLTFTN SEDLKQRLDR IERYGSSKIH PGRKSLRSKD SIKYVIFDLG 60
61 GMTSIDSSAA QVLEEIITSY KRRNVFIYLV NVSINDKVRR RLFKAGVAAS VERAQANNNE 120
121 NNTSNTFSDA GETYSPYFDS IDAALYEIEK MKIKGNNVPN NDSESFMSNT LFNSSLV
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1auzA |
| Description: | SOLUTION STRUCTURE OF SPOIIAA, A PHOSPHORYLATABLE COMPONENT OF THE SYSTEM THAT REGULATES TRANSCRIPTION FACTOR SIGMA-F OF BACILLUS SUBTILIS, NMR, 24 STRUCTURES |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.9933616198208 | bayes_pls_golite062009 |
| protein binding | 1.73254574073085 | bayes_pls_golite062009 |
