| Protein: | SRP68 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 599 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRP68.
| Description | E-value | Query Range |
Subject Range |
|
|
685.0 | [0..3] | [566..59] |
|
|
683.0 | [0..3] | [566..54] |
|
|
672.0 | [0..3] | [566..58] |
|
|
664.0 | [0..24] | [566..78] |
|
|
662.0 | [0..3] | [566..59] |
|
|
661.0 | [0..3] | [566..50] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MVAYSPIIAT YGNRAEQFLE TDSDFAKYHA KLNKKLQHLR SRCHLVTKDT KKYSSKNKYG 60
61 EINSEDYDNK TKLIGVLILL HAERDLALAE TLKLRA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [97-227] |
1 11 21 31 41 51
| | | | | |
1 RQRGKLKKSE EKVLSTRLKK ACKTADKLVN VTQNEQQWIT RAQYLAFAKL VHSEYLINGK 60
61 RFKRKDNAKI SNNLALVFAA LEHLKNLSLL AEEVVDNIVN KYQYSLKQYA GNLITTPEIN 120
121 NFIVERVQSD E
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.975 | a.8.3 | Families 57/38 glycoside transferase middle domain |
|
Region A: Residues: [228-599] |
1 11 21 31 41 51
| | | | | |
1 NKDDELVKLL LDNGFNMKKI TTSTEDQKVT TNINWRSFNA KIIDAEVAQF LEQGLSIHPT 60
61 QITQYTQRLS KLEKALDRHE FFIANHDDQD DIDEMVENSS ENNQIILAYI KYNILLTSIS 120
121 RERDLFTHLW NQWLKLNTSL PSKLTKYKEM ERIVKNLTKY LSDIMELPGV YSDDELLSQL 180
181 DLCKLYFQLF LNTGCLSVLY QSKGRYMEAL ALYVDAYRRL ENKLSEIESL DEILLPANLL 240
241 SLNSVRSLQK RIENGGNSVI TLAEYEKRNH GGSLGKYDLT VIEKLDSKKI LPTDIQLKNL 300
301 FPLKPKMLPI PSKPTLFDLA FNYITYDKQE PSASQVKDSV TETESISQTP ISNEQTEGEP 360
361 KKKRGFLGLF GR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
