| Protein: | ALG5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 334 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALG5.
| Description | E-value | Query Range |
Subject Range |
|
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6.0E-67 | [1..334] | [1..334] |
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1.0E-54 | [13..328] | [5..313] |
|
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3.0E-54 | [17..330] | [10..317] |
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7.0E-54 | [7..332] | [3..319] |
|
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3.0E-53 | [75..321] | [2..221] |
|
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4.0E-53 | [3..331] | [25..437] |
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6.0E-53 | [11..330] | [5..318] |
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2.0E-52 | [11..330] | [4..317] |
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3.0E-52 | [57..331] | [52..302] |
|
Region A: Residues: [1-67] |
1 11 21 31 41 51
| | | | | |
1 MRALRFLIEN RNTVFFTLLV ALVLSLYLLV YLFSHTPRPP YPEELKYIAI DEKGHEVSRA 60
61 LPNLNEH
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.731 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.557 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.453 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.689 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.667 | a.159.2 | FF domain |
| View | Download | 0.451 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.444 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.435 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.422 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.416 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.411 | a.4.1 | Homeodomain-like |
| View | Download | 0.386 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.367 | a.55.1 | IHF-like DNA-binding proteins |
| View | Download | 0.361 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.334 | d.120.1 | Cytochrome b5 |
| View | Download | 0.322 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.320 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.315 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.314 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.291 | a.112.1 | Description not found. |
| View | Download | 0.289 | a.21.1 | HMG-box |
| View | Download | 0.287 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.276 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.276 | a.2.3 | Chaperone J-domain |
| View | Download | 0.269 | d.120.1 | Cytochrome b5 |
| View | Download | 0.262 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.260 | a.4.1 | Homeodomain-like |
| View | Download | 0.260 | d.58.17 | Metal-binding domain |
| View | Download | 0.259 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.253 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.253 | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.251 | a.5.3 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.243 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.239 | a.28.1 | ACP-like |
| View | Download | 0.237 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.231 | a.74.1 | Cyclin-like |
| View | Download | 0.230 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.215 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.213 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.213 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.211 | a.64.1 | Saposin |
| View | Download | 0.208 | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.204 | a.4.1 | Homeodomain-like |
| View | Download | 0.201 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
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Region A: Residues: [68-217] |
1 11 21 31 41 51
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1 QDDEEIFLSV VIPSYNETGR ILLMLTDAIS FLKEKYGSRW EIVIVDDGST DNTTQYCLKI 60
61 CKEQFKLNYE QFRIIKFSQN RGKGGAVRQG FLHIRGKYGL FADADGASKF SDVEKLIDAI 120
121 SKIETSSTDL KTTKPAVAIG SRAHMVNTEA
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| Detection Method: | |
| Confidence: | 10.69897 |
| Match: | 1h7lA_ |
| Description: | Spore coat polysaccharide biosynthesis protein SpsA |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [218-334] |
1 11 21 31 41 51
| | | | | |
1 VIKRSMIRNC LMYGFHTLVF IFGIRSIKDT QCGFKLFNRA AILKIFPYLH TEGWIFDVEI 60
61 LILAIRKRIQ IEEIPISWHE VDGSKMALAI DSIKMAKDLV IIRMAYLLGI YRDNKKC
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
