| Protein: | PRP46 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 451 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRP46.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [2..451] | [1276..1726] |
|
|
0.0 | [3..451] | [969..1460] |
|
|
0.0 | [5..451] | [822..1268] |
|
Region A: Residues: [1-367] |
1 11 21 31 41 51
| | | | | |
1 MDGNDHKVEN LGDVDKFYSR IRWNNQFSYM ATLPPHLQSE MEGQKSLLMR YDTYRKESSS 60
61 FSGEGKKVTL QHVPTDFSEA SQAVISKKDH DTHASAFVNK IFQPEVAEEL IVNRYEKLLS 120
121 QRPEWHAPWK LSRVINGHLG WVRCVAIDPV DNEWFITGSN DTTMKVWDLA TGKLKTTLAG 180
181 HVMTVRDVAV SDRHPYLFSV SEDKTVKCWD LEKNQIIRDY YGHLSGVRTV SIHPTLDLIA 240
241 TAGRDSVIKL WDMRTRIPVI TLVGHKGPIN QVQCTPVDPQ VVSSSTDATV RLWDVVAGKT 300
301 MKVLTHHKRS VRATALHPKE FSVASACTDD IRSWGLAEGS LLTNFESEKT GIINTLSINQ 360
361 DDVLFAG
|
| Detection Method: |  |
| Confidence: | 214.0 |
| Match: | 1nexB_ |
| Description: | Cdc4 F-box and linker domains; Cdc4 propeller domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [368-451] |
1 11 21 31 41 51
| | | | | |
1 GDNGVLSFYD YKSGHKYQSL ATREMVGSLE GERSVLCSTF DKTGLRLITG EADKSIKIWK 60
61 QDETATKESE PGLAWNPNLS AKRF
|
| Detection Method: | |
| Confidence: | 218.54902 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
