Protein: | NAN1 |
Organism: | Saccharomyces cerevisiae |
Length: | 896 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAN1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [30..726] | [865..1484] |
|
0.0 | [139..789] | [1164..1748] |
|
0.0 | [28..758] | [545..1190] |
Region A: Residues: [1-172] |
1 11 21 31 41 51 | | | | | | 1 MTQSLGIEQY KLSVVSGGKP ALNNLSSVTG NKNIARLSQD QRNYIIPFNN QIKVYSVETR 60 61 QCVKTLKFAN NSLLSGIFLQ EEENNESIVK ILLGDITVPQ QEDAHLITVF TNNGHVIVLN 120 121 YKGKLVESPK HFKISLADEK LANVFHSEGN YRILTTFKDP SQKAHNSLQS YR |
Detection Method: | |
Confidence: | 38.522879 |
Match: | 1nexB_ |
Description: | Cdc4 F-box and linker domains; Cdc4 propeller domain |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [173-536] |
1 11 21 31 41 51 | | | | | | 1 LYALTFDDAK KQFEVAHQAE WHNVILSNIS SNGKLLAHMC KDVSTKDHEH KSISVVSLFD 60 61 DSVNLSFPLG SILSSQTQSL SYNTRYVSSM AIDNMGQQLA VGFASGVISI VSLADLQIRL 120 121 LKWHIDSVLS LSFSHDGSYL LSGGWEKVMS LWQLETNSQQ FLPRLNGIII DCQVLGPQGN 180 181 YYSLILQMTE NNSNSDYQFL LLNASDLTSK LSINGPLPVF NSTIKHIQQP ISAMNTKNSN 240 241 SITSLNHSKK KQSRKLIKSR RQDFTTNVEI NPINKNLYFP HISAVQIFDF YKNEQVNYQY 300 301 LTSGVNNSMG KVRFELNLQD PIITDLKFTK DGQWMITYEI EYPPNDLLSS KDLTHILKFW 360 361 TKND |
Detection Method: | |
Confidence: | 56.69897 |
Match: | 1erjA_ |
Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [537-632] |
1 11 21 31 41 51 | | | | | | 1 NETNWNLKTK VINPHGISVP ITKILPSPRS VNNSQGCLTA DNNGGLKFWS FDSHESNWCL 60 61 KKISLPNFNH FSNSVSLAWS QDGSLIFHGF DDKLQI |
Detection Method: | |
Confidence: | 58.0 |
Match: | 1gg2B_ |
Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 1.90408871052739 | bayes_pls_golite062009 |
protein binding | 1.47118967208188 | bayes_pls_golite062009 |
catalytic activity | 0.233388920718075 | bayes_pls_golite062009 |
Region A: Residues: [633-896] |
1 11 21 31 41 51 | | | | | | 1 LDFDTFKKFE SLENTKTVSE FTLDSEIQTV KLINDTNLIV ATRTTLNAIN LLRGQVINSF 60 61 DLYPFVNGVY KNGHMDRLIT CDERTGNIAL VINQQLTDLD GVPTINYKSR IIIFDSDLST 120 121 KLGNFTHHEY ISWIGWNYDT DFIFLDIEST LGVVGTTVNT QLSDEVNNEG ILDGLVSNTI 180 181 TTSASNSDIF AEQLHKLSSR GKKSDTRDKN TNDNDEDEED IALEFINGEK KDKLVNMNSF 240 241 TSMFDNIQNV QMDTFFDRVM KVLT |
Detection Method: | |
Confidence: | 4.045757 |
Match: | 1l0qA_ |
Description: | Surface layer protein |
Matching Structure (courtesy of the PDB): |