| Protein: | NAN1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 896 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAN1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [30..726] | [865..1484] |
|
|
0.0 | [139..789] | [1164..1748] |
|
|
0.0 | [28..758] | [545..1190] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MTQSLGIEQY KLSVVSGGKP ALNNLSSVTG NKNIARLSQD QRNYIIPFNN QIKVYSVETR 60
61 QCVKTLKFAN NSLLSGIFLQ EEENNESIVK ILLGDITVPQ QEDAHLITVF TNNGHVIVLN 120
121 YKGKLVESPK HFKISLADEK LANVFHSEGN YRILTTFKDP SQKAHNSLQS YR
|
| Detection Method: |  |
| Confidence: | 38.522879 |
| Match: | 1nexB_ |
| Description: | Cdc4 F-box and linker domains; Cdc4 propeller domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [173-536] |
1 11 21 31 41 51
| | | | | |
1 LYALTFDDAK KQFEVAHQAE WHNVILSNIS SNGKLLAHMC KDVSTKDHEH KSISVVSLFD 60
61 DSVNLSFPLG SILSSQTQSL SYNTRYVSSM AIDNMGQQLA VGFASGVISI VSLADLQIRL 120
121 LKWHIDSVLS LSFSHDGSYL LSGGWEKVMS LWQLETNSQQ FLPRLNGIII DCQVLGPQGN 180
181 YYSLILQMTE NNSNSDYQFL LLNASDLTSK LSINGPLPVF NSTIKHIQQP ISAMNTKNSN 240
241 SITSLNHSKK KQSRKLIKSR RQDFTTNVEI NPINKNLYFP HISAVQIFDF YKNEQVNYQY 300
301 LTSGVNNSMG KVRFELNLQD PIITDLKFTK DGQWMITYEI EYPPNDLLSS KDLTHILKFW 360
361 TKND
|
| Detection Method: | |
| Confidence: | 56.69897 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [537-632] |
1 11 21 31 41 51
| | | | | |
1 NETNWNLKTK VINPHGISVP ITKILPSPRS VNNSQGCLTA DNNGGLKFWS FDSHESNWCL 60
61 KKISLPNFNH FSNSVSLAWS QDGSLIFHGF DDKLQI
|
| Detection Method: | |
| Confidence: | 58.0 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.90408871052739 | bayes_pls_golite062009 |
| protein binding | 1.47118967208188 | bayes_pls_golite062009 |
| catalytic activity | 0.233388920718075 | bayes_pls_golite062009 |
|
Region A: Residues: [633-896] |
1 11 21 31 41 51
| | | | | |
1 LDFDTFKKFE SLENTKTVSE FTLDSEIQTV KLINDTNLIV ATRTTLNAIN LLRGQVINSF 60
61 DLYPFVNGVY KNGHMDRLIT CDERTGNIAL VINQQLTDLD GVPTINYKSR IIIFDSDLST 120
121 KLGNFTHHEY ISWIGWNYDT DFIFLDIEST LGVVGTTVNT QLSDEVNNEG ILDGLVSNTI 180
181 TTSASNSDIF AEQLHKLSSR GKKSDTRDKN TNDNDEDEED IALEFINGEK KDKLVNMNSF 240
241 TSMFDNIQNV QMDTFFDRVM KVLT
|
| Detection Method: | |
| Confidence: | 4.045757 |
| Match: | 1l0qA_ |
| Description: | Surface layer protein |
Matching Structure (courtesy of the PDB): |
|
