| Protein: | TFB2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 513 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TFB2.
| Description | E-value | Query Range |
Subject Range |
|
|
659.0 | [0..9] | [510..36] |
|
|
646.0 | [0..9] | [510..36] |
|
|
635.0 | [0..9] | [510..32] |
|
|
630.0 | [0..9] | [510..26] |
|
|
619.0 | [0..9] | [509..19] |
|
|
619.0 | [0..9] | [509..19] |
|
|
617.0 | [0..9] | [509..19] |
|
|
616.0 | [0..9] | [509..18] |
|
|
614.0 | [0..9] | [509..19] |
|
Region A: Residues: [1-414] |
1 11 21 31 41 51
| | | | | |
1 MSDYSLKHSV TQYLEEIPQQ VQNRLYTSPA TCLAIYRILP PLAKFFIMAM VFNENEVPLL 60
61 DLDKWVNSNG KLQFQNAIKS MKSLHLLIPN KSSGTLMINL NPTFKISLRN ALTGGEVQNS 120
121 FGVVVEENVV SLDLLDEYSA NKWETILHFM VGTPLAKIPS EKVLNLLKHS KLMEEVNSTG 180
181 EFKITNEGFQ FLLQEINSQL WTLLLQYLKM IETSKMDLVD VLHFIFMLGA LEVGKAYKID 240
241 ALSETQRIML QDMRDYGLVF QKHSNDSIFY PTKLALMLTS DTKTIRSASN AMDSVLRQNR 300
301 EEPSVNEDGA NGKSTTDITT SDDLNKAGLK NQDIPDGSLI VETNFKIYSY SNSPLQIAVL 360
361 SLFVHLKARF VNMVLGQITR ESIRRALTNG ITADQIIAYL ETHAHPQMRR LAEE
|
| Detection Method: |  |
| Confidence: | 291.136677 |
| Match: | PF03849 |
| Description: | Transcription factor Tfb2 |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [415-513] |
1 11 21 31 41 51
| | | | | |
1 KLEKKLELDP NCKEPLQVLP PTVVDQIRLW QLELDRVITY EGSLYSDFET SQEYNLLSKY 60
61 AQDIGVLLWK DDKKKKFFIS KEGNSQVLDF AKRKLKKKQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.799 | d.68.4 | YhbY-like |
| View | Download | 0.794 | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
| View | Download | 0.794 | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
| View | Download | 0.765 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.740 | d.95.1 | Glucose permease domain IIB |
| View | Download | 0.728 | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
| View | Download | 0.728 | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
| View | Download | 0.723 | d.95.1 | Glucose permease domain IIB |
| View | Download | 0.719 | d.95.1 | Glucose permease domain IIB |
| View | Download | 0.710 | d.95.2 | Homing endonucleases |
