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View Structure Prediction Details

Protein: YPL107W
Organism: Saccharomyces cerevisiae
Length: 248 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPL107W.

Description E-value Query
Range
Subject
Range
gi|49526364, gi|... - gi|50289249|ref|XP_447055.1| unnamed protein product [Candida glabrata], gi|49526364|emb|CAG59988.1|...
gi|49526364 - gi|49526364|emb|CAG59988.1| unnamed protein product [Candida glabrata]
217.0 [0..16] [240..15]
gi|45201310, gi|... - gi|45201310|ref|NP_986880.1| AGR214Cp [Ashbya gossypii ATCC 10895], gi|44986164|gb|AAS54704.1| AGR21...
gi|44986164 - gi|44986164|gb|AAS54704.1| AGR214Cp [Ashbya gossypii ATCC 10895]
189.0 [0..15] [230..73]
gi|49644196 - gi|49644196|emb|CAH00148.1| KLLA0E24619p [Kluyveromyces lactis]
gi|49644196, gi|... - gi|50310095|ref|XP_455061.1| unnamed protein product [Kluyveromyces lactis], gi|49644196|emb|CAH0014...
184.0 [0..10] [224..1]
gi|21592698, gi|... - gi|21592698|gb|AAM64647.1| unknown [Arabidopsis thaliana], gi|20147183|gb|AAM10308.1| AT5g17280/MKP1...
134.0 [0..10] [117..31]
orf19.12069, orf... - orf19.4600 CGDID:CAL0003579 Assembly 19, Contig19-10212 (75114, 75821) CDS, translated using codon t...
gi|238881646 - gi|238881646|gb|EEQ45284.1| conserved hypothetical protein [Candida albicans WO-1]
gi|68466380, gi|... - gi|68466380|ref|XP_722672.1| hypothetical protein CaO19.4600 [Candida albicans SC5314], gi|68466085|...
123.0 [0..10] [147..59]
gi|49652766, gi|... - gi|50412052|ref|XP_457101.1| hypothetical protein DEHA0B03135g [Debaryomyces hansenii CBS767], gi|49...
122.0 [0..8] [157..47]
gi|109476948 - gi|109476948|ref|XP_001065840.1| PREDICTED: similar to CG5946-PB, isoform B [Rattus norvegicus]
116.0 [0..27] [130..1]
YJH2_SCHPO - UPF0651 protein P31B10.02, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=S...
SPCP31B10.02 - conserved eukaryotic protein
115.0 [0..53] [154..30]
gi|13435789 - gi|13435789|gb|AAH04750.1| Cyb5rl protein [Mus musculus]
105.0 [0..72] [130..18]

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Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRNQGWSLL YRIYPVRRFT RYSRVDMTFE GNTQDISTSV EERMTTVFGG RLKGEPPRST  60
   61 SRVLSGGTKK IAGVQVPAKP QEPDNCCMSG CVNCVWEIYS EDLRDWKHRR KEAAEKIAGT 120
  121 KEKWPKDWNP PLGLLHMENV PVELREKKLE TDSKKAEQPH DLSAIRSLFP KRKGPLPKSV 180
  181 LAAKRKNIAL RH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [193-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYEQKDGGDQ SVSESDADEG WEDIPVYVKA FAEFESKKRL QKIRRQEEIK KRTALV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle