| Protein: | UBP16 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 499 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP16.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-86 | [1..499] | [1..499] |
|
|
9.0E-83 | [5..474] | [72..543] |
|
|
2.0E-76 | [33..455] | [219..593] |
|
|
6.0E-76 | [40..467] | [152..525] |
|
|
1.0E-72 | [3..450] | [250..684] |
|
Region A: Residues: [1-447] |
1 11 21 31 41 51
| | | | | |
1 MSWIKNVTES PTSLIKKVSC GLIIAASLYA IAPSLSALVF GDSKQSIGKY TTVGLINRGN 60
61 DCFITSSLQG LAGIPRFVEY LKRIRTVLLE LETKLSNNAK GDNPTVDNTT RHSRLENSSN 120
121 SLAPLHESLT SLILDLISVK DRKTSISPKI VINTLESIFK SKISSKQNDA HEFTLILLQT 180
181 LQEERSKLID YSKQICNLNI PKFPFEGETS KFLVCLKCKG LSEPSYKQTF IRELSVPQQT 240
241 SENLSNILAH DETEIIDDYS CLICQIRAIL NHEEYRNFKD CTPDEILMLD RLKNYATKAP 300
301 INENLPFEVE QYVKRYSKGN LQVSNIKGKV IKKDVVVQLP DILIVHLSRS TFNGITYSRN 360
361 PCNVKFGERI TLSEYTLAES GTITENRQVK YNLKSVVKHT GSHSSGHYMC YRRKTEIRFG 420
421 KEDESSFRRA PVVNNEVNKN REQNVAH
|
| Detection Method: |  |
| Confidence: | 36.522879 |
| Match: | 1nbfA_ |
| Description: | Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [448-499] |
1 11 21 31 41 51
| | | | | |
1 NDYKKSRYKK VKNALRYPYW QISDTAIKES TASTVLNEQK YAYMLYYERV NK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.805 | 0.127 | protein deubiquitination | a.60.1 | SAM/Pointed domain |
