| Protein: | UBP16 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 499 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP16.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-86 | [1..499] | [1..499] |
|
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9.0E-83 | [5..474] | [72..543] |
|
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2.0E-76 | [33..455] | [219..593] |
|
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6.0E-76 | [40..467] | [152..525] |
|
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1.0E-72 | [3..450] | [250..684] |
|
Region A: Residues: [1-447] |
1 11 21 31 41 51
| | | | | |
1 MSWIKNVTES PTSLIKKVSC GLIIAASLYA IAPSLSALVF GDSKQSIGKY TTVGLINRGN 60
61 DCFITSSLQG LAGIPRFVEY LKRIRTVLLE LETKLSNNAK GDNPTVDNTT RHSRLENSSN 120
121 SLAPLHESLT SLILDLISVK DRKTSISPKI VINTLESIFK SKISSKQNDA HEFTLILLQT 180
181 LQEERSKLID YSKQICNLNI PKFPFEGETS KFLVCLKCKG LSEPSYKQTF IRELSVPQQT 240
241 SENLSNILAH DETEIIDDYS CLICQIRAIL NHEEYRNFKD CTPDEILMLD RLKNYATKAP 300
301 INENLPFEVE QYVKRYSKGN LQVSNIKGKV IKKDVVVQLP DILIVHLSRS TFNGITYSRN 360
361 PCNVKFGERI TLSEYTLAES GTITENRQVK YNLKSVVKHT GSHSSGHYMC YRRKTEIRFG 420
421 KEDESSFRRA PVVNNEVNKN REQNVAH
|
| Detection Method: |  |
| Confidence: | 36.522879 |
| Match: | 1nbfA_ |
| Description: | Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [448-499] |
1 11 21 31 41 51
| | | | | |
1 NDYKKSRYKK VKNALRYPYW QISDTAIKES TASTVLNEQK YAYMLYYERV NK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.805 | 0.127 | protein deubiquitination | a.60.1 | SAM/Pointed domain |
| View | Download | 0.742 | 0.127 | protein deubiquitination | a.5.2 | UBA-like |
| View | Download | 0.659 | 0.127 | protein deubiquitination | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.677 | 0.127 | protein deubiquitination | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.552 | 0.127 | protein deubiquitination | d.59.1 | Ribosomal protein L30p/L7e |
| View | Download | 0.515 | 0.127 | protein deubiquitination | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.438 | 0.127 | protein deubiquitination | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.429 | 0.127 | protein deubiquitination | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.424 | 0.127 | protein deubiquitination | d.42.1 | POZ domain |
| View | Download | 0.396 | 0.127 | protein deubiquitination | a.4.1 | Homeodomain-like |
| View | Download | 0.384 | 0.127 | protein deubiquitination | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.378 | 0.127 | protein deubiquitination | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.349 | 0.127 | protein deubiquitination | a.60.1 | SAM/Pointed domain |
| View | Download | 0.347 | 0.127 | protein deubiquitination | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.299 | 0.127 | protein deubiquitination | a.60.1 | SAM/Pointed domain |
| View | Download | 0.293 | 0.127 | protein deubiquitination | d.58.17 | Metal-binding domain |
| View | Download | 0.271 | 0.127 | protein deubiquitination | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.235 | 0.127 | protein deubiquitination | a.3.1 | Cytochrome c |
| View | Download | 0.235 | 0.127 | protein deubiquitination | a.60.2 | RuvA domain 2-like |
| View | Download | 0.229 | 0.127 | protein deubiquitination | d.45.1 | ClpS-like |
| View | Download | 0.205 | 0.127 | protein deubiquitination | d.74.2 | C-terminal domain of arginine repressor |
