| Protein: | TIM50 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 476 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIM50.
| Description | E-value | Query Range |
Subject Range |
|
|
381.0 | [0..44] | [426..31] |
|
|
379.0 | [0..1] | [471..1] |
|
|
374.0 | [0..79] | [394..33] |
|
|
371.0 | [0..80] | [394..137] |
|
|
369.0 | [0..80] | [394..137] |
|
|
368.0 | [0..79] | [394..33] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MLSILRNSVR LNSRALRVVP SAANTLTSVQ ASRRLLTSYS SFLQKETKDD KPKSILTDDM 60
61 LFKAGVDVDE KGQGKNEETS GEGGEDKNEP SSKSEKSRRK RQTSTDIKRE KYANWFYIFS 120
121 LSALTGTAIY MARDWEPQES EELKKDIDNG YTLSLM
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [157-348] |
1 11 21 31 41 51
| | | | | |
1 YKRFKARFNS MFTYFQEPPF PDLLPPPPPP PYQRPLTLVI TLEDFLVHSE WSQKHGWRTA 60
61 KRPGADYFLG YLSQYYEIVL FSSNYMMYSD KIAEKLDPIH AFVSYNLFKE HCVYKDGVHI 120
121 KDLSKLNRDL SKVIIIDTDP NSYKLQPENA IPMEPWNGEA DDKLVRLIPF LEYLATQQTK 180
181 DVRPILNSFE DK
|
| Detection Method: | |
| Confidence: | 56.221849 |
| Match: | 2hhlA |
| Description: | No description for 2hhlA was found. |
|
Region A: Residues: [349-476] |
1 11 21 31 41 51
| | | | | |
1 KNLAEEFDHR VKKLKDKFYG DHKSGGNWAM TALGLGNSLG GSTKFPLDLI HEEGQKNYLM 60
61 FMKMIEEEKE KIRIQQEQMG GQTFTLKDYV EGNLPSPEEQ MKIQLEKQKE VDALFEEEKK 120
121 KKKIAESK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
