| Protein: | SKS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 502 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SKS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [3..498] | [20..447] |
|
|
0.0 | [3..496] | [88..513] |
|
|
0.0 | [3..498] | [81..508] |
|
|
0.0 | [3..496] | [78..503] |
|
|
0.0 | [2..499] | [77..506] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MLSDCLLNNF RITAQIGSGA YGLVFHVVDI LTSREYAVKT VFKSSSMDEF YNKNGLNNNS 60
61 QVARTTLLQT QLYHFFKSFQ KKLFLPSVDL DSILQLTENE LNRLPHYRE
|
|
Region B: Residues: [125-141] |
1 11 21 31 41 51
| | | | | |
1 IHQVLESSIA TFIVMDY
|
| Detection Method: |  |
| Confidence: | 165.69897 |
| Match: | 1ql6A_ |
| Description: | gamma-subunit of glycogen phosphorylase kinase (Phk) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [110-124] |
1 11 21 31 41 51
| | | | | |
1 IAFQLRVQSH GNIVK
|
|
Region B: Residues: [142-148] |
1 11 21 31 41 51
| | | | | |
1 YDRDLFT
|
|
Region C: Residues: [171-213] |
1 11 21 31 41 51
| | | | | |
1 CSALDHCHRL GIYHCDIKPE NVLLDRNDNA YLCDFGLSTK SKY
|
| Detection Method: | |
| Confidence: | 165.69897 |
| Match: | 1ql6A_ |
| Description: | gamma-subunit of glycogen phosphorylase kinase (Phk) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [149-170] |
1 11 21 31 41 51
| | | | | |
1 SIVDDKHFVN HGILIKKVFL QL
|
|
Region B: Residues: [214-356] |
1 11 21 31 41 51
| | | | | |
1 LAPNVCVGSS YYMAPERILY CLNTTTNGIH VDECCSSLPT DTGDIWSLGI ILINLTCIRN 60
61 PWLKAHQKED NTFQHFANDN NVLKKILPIS DELFTVLTKI LQLNPYTRID MKTLMSEVSS 120
121 LTSFTREGPL SQVPILSSEV YMT
|
| Detection Method: | |
| Confidence: | 165.69897 |
| Match: | 1ql6A_ |
| Description: | gamma-subunit of glycogen phosphorylase kinase (Phk) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [357-502] |
1 11 21 31 41 51
| | | | | |
1 HIIRNENLFL SDLSHFSADQ EQQQQQQQQQ QQVQEQEQEQ KQEQIQNQEQ AQQQQEEEDA 60
61 EPESDIPSTY NSDGSMEKYE YTNNHNNSTF LTSSMDSTPY QSDIDDVSAS KDCKFQQDTL 120
121 RNRLLCLQMN FSTLTDGPNE KWLPDY
|
| Detection Method: | |
| Confidence: | 5.30103 |
| Match: | 1niwA_ |
| Description: | Calmodulin |
Matching Structure (courtesy of the PDB): |
|
