| Protein: | SOG2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 791 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SOG2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [9..791] | [9..791] |
|
|
0.0 | [2..527] | [131..677] |
|
|
0.0 | [2..609] | [134..745] |
|
|
0.0 | [2..542] | [112..677] |
|
|
0.0 | [2..567] | [93..732] |
|
Region A: Residues: [1-199] |
1 11 21 31 41 51
| | | | | |
1 MVATSSKRTL DPKEEHLPAD KTSTNSSNTI ISELATQEKS SSSGTTLKLI ALNIKSISDE 60
61 DVGYIQNVER LSLRKNHLTS LPASFKRLSR LQYLDLHNNN FKEIPYILTQ CPQLEILDLS 120
121 SNEIEALPDE ISSFWQDNIR VLSLKDNNVT SIRNLKSITK LNKLSILDLE DNKIPKEELD 180
181 QVQSYTPFHT GIPKEEYWA
|
| Detection Method: |  |
| Confidence: | 55.491979 |
| Match: | 1k14A_ |
| Description: | No description for 1k14A_ was found. |
|
Region A: Residues: [200-316] |
1 11 21 31 41 51
| | | | | |
1 IAISRYLKDH PNLPTPEPKI SRAAKRMGFI NTNLSNGAMN ENNIISLAPS ANTTISASTA 60
61 MVSSNQTSAT SFSGTVNAES EQSGAVNGTE LYNHTKYNDY FKRLSILPEE SMSNGHQ
|
| Detection Method: | |
| Confidence: | 10.522879 |
| Match: | 1dceA_ |
| Description: | Rab geranylgeranyltransferase alpha-subunit, N-terminal domain; Rab geranylgeranyltransferase alpha-subunit, insert domain; Rab geranylgeranyltransferase alpha-subunit, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [317-791] |
1 11 21 31 41 51
| | | | | |
1 KISHAELVVS CRKLLFSFTE CQQAIRKIAS FCKEKAVAVN VVSLLYSVRS HTDNLVEVLQ 60
61 QTENEDESHD QALIKLCLTI ITNFKQIITL LRKNFEIFFK EDDLCFIRMF YMTLMCAYME 120
121 MYNAWSFIKE DDQVSGSASK APKKHSFSRH ETSSSSITSG GGPAASTTST HCSGNIKLLP 180
181 KTRSTRTPSA SALLSNSNIL TGDTTAVPLL SPNLNGAHTH GPILGHQNAI SNGSSQTNMN 240
241 EVKTTSDTIP RQQLLQHNKS ISDSKKESQA HEPKQHPVMT SSIINASNSN NVSNVNITPP 300
301 PMNGGGAANS SANVVETNID IQLYQTLSTV VKMVSVVYNQ LTSEISKIAI ASTMGKQILT 360
361 DSLAPKIRDL TETCRQAMDL SKQLNERLNV LIPNDSNSEK YLTSLEKLKT WEIMNSFLKV 420
421 IISILANTKI VMSDVPNLNE LRPNLANLAK ITKDVTVILD LSSYKAVSVS ANSPE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
