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View Structure Prediction Details

Protein: PUT4
Organism: Saccharomyces cerevisiae
Length: 627 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for PUT4.

Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNILPFHKN NRHSAGVVTC ADDVSGDGSG GDTKKEEDVV QVTESPSSGS RNNHRSDNEK  60
   61 DDAIRMEKIS KNQSASSNGT IREDLIMDVD LEK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [94-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPSVDGDSEP HKLKQGLQSR HVQLIALGGA IGTGLLVGTS STLHTCGPAG LFISYIIISA  60
   61 VIYPIMCALG EMVCFLPGDG SDSAGSTANL VTRYVDPSLG FATGWNYFYC YVILVAAECT 120
  121 AASGVVEYWT TAVPKGVWIT IFLCVVVILN FSAVKVYGES EFWFASIKIL CIVGLIILSF 180
  181 ILFWGGGPNH DRLGFRYWQH PG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [296-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AFAHHLTGGS LGNFTDIYTG IIKGAFAFIL GPELVCMTSA ECADQRRNIA KASRRFVWRL  60
   61 IFFYVLGTLA ISVIVPYNDP TLVNALAQGK PGAGSSPFVI GIQNAGIKVL PHIINGCILT 120
  121 SAWSAANAFM FASTRSL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [433-627]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTMAQTGQAP KCLGRINKWG VPYVAVGVSF LCSCLAYLNV SSSTADVFNW FSNISTISGF  60
   61 LGWMCGCIAY LRFRKAIFYN GLYDRLPFKT WGQPYTVWFS LIVIGIITIT NGYAIFIPKY 120
  121 WRVADFIAAY ITLPIFLVLW FGHKLYTRTW RQWWLPVSEI DVTTGLVEIE EKSREIEEMR 180
  181 LPPTGFKDKF LDALL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle